Table 2 Proteins showing significant changes in responses to WS in the M4 genotype
n. | Name (f.c.) | Accession | Δ:WS/C |
|---|---|---|---|
Carbon and energy metabolism (1, 2, 3, 4, 5, 6, 7, 8, 9, 25) | |||
 474 | alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like (2) | XP_002279075.2 | new |
 542 | isocitrate dehydrogenase [NAD] catalytic subunit 5, mitochondrial-like (8) | XP_002281826.1 | 14.46 |
 231 | succinate-semialdehyde dehydrogenase (acetylating)-like (5, 26) | XP_002268625.1 | 7.33 |
 481 | 2-oxoglutarate dehydrogenase, mitochondrial-like (8) | XP_002279332.2 | 6.00 |
 757 | ATP-citrate synthase alpha chain protein 2 isoform 2 (8) | XP_003633614.1 | 4.05 |
 463 | formate dehydrogenase, mitochondrial (25) | XP_002278444.1 | 3.05 |
 695 | phosphoenolpyruvate carboxylase, housekeeping isozyme isoform 1 (4) | XP_002285441.1 | 2.84 |
 446 | aldehyde dehydrogenase family 7 member A1 (5, 8, 20) | XP_002278093.1 | 2.34 |
 251 | L-idonate 5-dehydrogenase (3, 5, 26) | XP_002269895.1 | 2.23 |
 626 | citrate synthase, glyoxysomal (6) | XP_002284064.1 | 2.20 |
 556 | UTP--glucose-1-phosphate uridylyltransferase isoform 1(4) | XP_002282276.1 | 2.20 |
 187 | glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform (7) | XP_002266527.1 | 2.16 |
 655 | phosphoglucomutase, cytoplasmic (4) | XP_002284729.1 | 2.01 |
 374 | pyruvate decarboxylase isozyme 1 (5) | XP_002275486.1 | −2.01 |
 718 | glucose-6-phosphate isomerase isoform 1 (4) | XP_002285696.1 | −2.12 |
 313 | pyruvate decarboxylase isozyme 2 (5) | XP_002272615.1 | −2.33 |
 116 | ferredoxin--NADP reductase, root isozyme, chloroplastic-like (7) | XP_002263658.2 | −2.40 |
 354 | enolase 1, chloroplastic-like (4) | XP_002274334.1 | −2.63 |
 269 | D-threo-aldose 1-dehydrogenase (2) | XP_002270562.1 | −2.65 |
 92 | L-idonate 5-dehydrogenase (3, 5) | Q1PSI9.2 | −2.93 |
 413 | dihydrolipoyl dehydrogenase (8, 11, 21) | XP_002276853.1 | −3.52 |
 495 | pyruvate kinase isozyme A, chloroplastic isoform 1 (4, 11) | XP_002279975.1 | −3.79 |
 557 | dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial-like (8, 11) | XP_002282287.1 | −4.11 |
 194 | glucose-6-phosphate 1-dehydrogenase, chloroplastic (7, 30) | XP_002266930.1 | −19.38 |
Cell Wall (10) | |||
 357 | probable xyloglucan endotransglucosylase/hydrolase protein B (10) | XP_002274520.1 | 11.89 |
 222 | UDP-glucose 4-epimerase GEPI48 (10) | XP_002268294.2 | 7.31 |
 34 | hypothetical protein VITISV_001144 (m.: 10) | CAN61024.1 | 3.39 |
 129 | beta-xylosidase/alpha-L-arabinofuranosidase 2-like (10, 33) | XP_002264183.2 | −2.07 |
 561 | probable rhamnose biosynthetic enzyme 1 (10) | XP_002282339.1 | −2.12 |
 772 | UDP-sugar pyrophospharylase isoform 2 (10) | XP_003634394.1 | −2.37 |
 508 | pectinesterase 2 (10) | XP_002280446.1 | −3.32 |
 12 | acetyl-CoA carboxylase carboxyltransferase beta subunit (10, 11, 29) | ABE47543.1 | d. |
 345 | probable xyloglucan endotransglucosylase/hydrolase protein 30-like (10) | XP_002273975.1 | d. |
Lipid Metabolism (11) | |||
 253 | putative esterase HI_1161 isoform 1 (11) | XP_002269958.1 | new |
 219 | phospholipase D alpha 1 (11, 27) | XP_002268195.1 | 2.44 |
 152 | 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic-like (11) | XP_002265207.1 | −2.23 |
 451 | biotin carboxyl carrier protein of acetyl-CoA carboxylase-like (11) | XP_002278151.2 | −2.64 |
 216 | 3-oxoacyl-[acyl-carrier-protein] reductase, chloroplastic (11, 26) | XP_002268080.1 | −3.72 |
 737 | 3-oxoacyl-[acyl-carrier-protein] synthase 3 A, chloroplastic-like (11) | XP_003631438.1 | −5.47 |
 623 | acyl-CoA-binding domain-containing protein 4-like isoform 1 (11) | XP_002284019.1 | −5.81 |
 648 | probable linoleate 9S-lipoxygenase 5 (11) | XP_002284535.2 | −7.06 |
 414 | biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic (11, 18) | XP_002276955.2 | d. |
N and amino acid metabolism (12, 13) | |||
 516 | arginase-like (13) | XP_002280690.2 | new |
 210 | alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial (13, 19) | XP_002267787.1 | 5.42 |
 178 | methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial (13) | XP_002266390.1 | 5.29 |
 170 | adenosylhomocysteinase isoform 1 (13) | XP_002266154.1 | 2.99 |
 787 | phosphoserine aminotransferase, chloroplastic-like (13, 27) | XP_003635669.1 | −2.04 |
 763 | 3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic-like (13) | XP_003633923.1 | −3.63 |
 428 | bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like (13) | XP_002277395.2 | −4.68 |
 25 | glutamine synthetase (12) | CAA63982.1 | −8.64 |
 177 | probable S-adenosylmethionine-dependent methyltransferase At5g37990-like (13, 17) | XP_002266288.2 | −30.63 |
 259 | hydroxyacylglutathione hydrolase 3, mitochondrial-like (13) | XP_002270140.1 | d. |
Secondary metabolism (16) | |||
 230 | anthocyanidin 5,3-O-glucosyltransferase (16, 26) | XP_002268560.1 | new |
 766 | caffeic acid 3-O-methyltransferase 1-like isoform 1 (16, 26) | XP_003634161.1 | new |
 678 | probable NAD(P)H-dependent oxidoreductase 1 (3, 16) | XP_002285219.1 | 12.08 |
 90 | chalcone-flavonone isomerase 1 (16, 27) | P51117.1 | 3.07 |
 206 | anthocyanidin 5,3-O-glucosyltransferase-like (16, 26) | XP_002267573.1 | 2.44 |
 135 | stilbene synthase 1 (16) | XP_002264455.1 | 2.32 |
 497 | chalcone--flavonone isomerase-like isoform 1 (16) | XP_002280158.1 | −2.09 |
 427 | probable cinnamyl alcohol dehydrogenase 1-like (16) | XP_002277375.1 | −2.88 |
 692 | probable cinnamyl alcohol dehydrogenase 1 (16) | XP_002285406.1 | −3.02 |
 574 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic (16) | XP_002282761.1 | −6.95 |
 247 | isoeugenol synthase 1 (16) | XP_002269639.1 | d. |
 670 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (16) | XP_002285130.1 | d. |
Hormone metabolism (17) | |||
 471 | auxin-induced protein PCNT115 isoform 1 (17, 26) | XP_002278850.1 | 18.40 |
 121 | linoleate 13S-lipoxygenase 2–1, chloroplastic (17) | XP_002263854.1 | 3.85 |
 515 | gibberellin 3-beta-dioxygenase 3 (17, 26) | XP_002280670.1 | d. |
 662 | gibberellin 20 oxidase 3-like (16, 17, 26) | XP_002284983.1 | d. |
Stress (20) | |||
 124 | stress-related protein-like (16) | XP_002263944.1 | new |
 715 | disease resistance response protein 206 (20) | XP_002285676.1 | new |
 581 | osmotin-like protein OSM34 (20) | XP_002282917.1 | 3.47 |
 653 | MLP-like protein 34 (20) | XP_002284578.1 | 7.22 |
 525 | osmotin-like protein (20) | XP_002281193.1 | 5.06 |
 91 | basic endochitinase (20) | P51613.1 | 2.93 |
 687 | topless-related protein 4-like isoform 1 (20, 33) | XP_002285341.2 | 2.45 |
 10 | chitinase class I basic (20) | ABD64684.1 | 2.38 |
 172 | putative germin-like protein 2–1 (12, 20, 27, 30, 34) | XP_002266227.1 | 2.38 |
 254 | endoplasmin homolog (20) | XP_002270014.2 | 2.33 |
 649 | MLP-like protein 28-like isoform 1 (20) | XP_002284538.1 | 2.17 |
 652 | MLP-like protein 28 (20) | XP_002284570.1 | 2.10 |
 359 | major allergen Pru av. 1 (20, 27, 34) | XP_002274617.1 | 2.08 |
 780 | heat shock cognate protein 80-like (20) | XP_003635036.1 | 2.01 |
 346 | major allergen Pru ar 1 (20, 27, 34) | XP_002273982.1 | −2.45 |
 643 | germin-like protein subfamily 1 member 17 (20, 27, 34) | XP_002284436.1 | −2.82 |
 334 | germin-like protein 9–3 (15, 20) | XP_002273554.1 | −3.62 |
 195 | putative germin-like protein 2–1 (12, 20, 27, 30, 34) | XP_002266984.1 | −4.25 |
 453 | germin-like protein 9–3 (15, 20) | XP_002278170.1 | −4.76 |
 537 | chitinase 2 (20) | XP_002281729.1 | −4.80 |
 102 | pathogen-related protein (20) | XP_002263121.1 | −7.46 |
 74 | unnamed protein product (m.: 11, 20) | CBI28159.3 | d. |
 583 | putative endo-1,3(4)-beta-glucanase 2-like (20) | XP_002282971.1 | d. |
Redox (21) | |||
 8 | catalase (21) | AAL83720.1 | 2.91 |
 714 | glutathione reductase, cytosolic (21) | XP_002285672.1 | 2.70 |
 607 | peroxiredoxin-2E, chloroplastic (21) | XP_002283652.1 | −2.02 |
Miscellaneous enzyme families (26) | |||
 193 | glutathione transferase GST 23-like isoform 1 (26, 28, 33) | XP_002266900.1 | 8.62 |
 777 | probable glutathione S-transferase parC-like isoform 2 (26) | XP_003634746.1 | 4.78 |
 15 | glutathione S-transferase (26) | ABL84692.1 | 2.08 |
 287 | tropinone reductase 1-like (26) | XP_002271432.1 | −2.14 |
 274 | epoxide hydrolase 2 (26) | XP_002270883.2 | −2.40 |
 323 | glutathione S-transferase zeta class-like isoform 1 (26) | XP_002273077.1 | −2.59 |
 238 | glutathione S-transferase U9 (26) | XP_002269118.1 | −2.93 |
 236 | probable glutathione S-transferase (26) | XP_002268911.1 | −3.06 |
 674 | NADP-dependent alkenal double bond reductase P1 (26, 34) | XP_002285167.1 | −3.38 |
 417 | l-Ala-D/L-Glu epimerase (26) | XP_002277056.1 | −3.45 |
 412 | UDP-glycosyltransferase 85A1-like (17, 26, 29) | XP_002276823.1 | −3.84 |
 197 | momilactone A synthase (26) | XP_002267041.1 | −4.51 |
 320 | momilactone A synthase-like (26) | XP_002272981.1 | −5.53 |
 127 | glutathione transferase GST 23 (26) | XP_002264054.1 | −7.67 |
 536 | glutathione S-transferase U7 isoform 1 (26, 28, 33) | XP_002281654.1 | −9.51 |
 512 | probable glutathione S-transferase (26, 28, 33) | XP_002280532.1 | −16.45 |
 527 | UDP-glycosyltransferase 83A1 (26) | XP_002281262.1 | d. |
 748 | epoxide hydrolase 2-like (26) | XP_003632381.1 | d. |
DNA/RNA (27, 28) | |||
 207 | DEAD-box ATP-dependent RNA helicase 37-like (27) | XP_002267581.2 | 31.87 |
 235 | DEAD-box ATP-dependent RNA helicase 56 (27, 28) | XP_002268833.1 | 11.78 |
 148 | transcription factor BTF3 (27, 34) | XP_002265041.1 | 4.42 |
 676 | polyadenylate-binding protein 2 (27) | XP_002285190.1 | −2.62 |
 502 | ribonuclease UK114-like (27) | XP_002280251.1 | −2.90 |
 39 | hypothetical protein VITISV_017556 (m.: 27) | CAN66609.1 | −3.96 |
 205 | uncharacterized protein LOC100253093 (m.: 27, 29, 34) | XP_002267536.1 | −5.72 |
 42 | hypothetical protein VITISV_020351 (probable ADP-ribosylation factor GTPase-activating protein AGD11) (27) | CAN67438.1 | d. |
 133 | KH domain-containing protein At4g18375 isoform 1 (27) | XP_002264417.1 | d. |
 240 | poly(rC)-binding protein 3-like (27) | XP_002269249.1 | d. |
Protein (29) | |||
 180 | miraculin (20, 29, 31) | XP_002266430.1 | 11.55 |
 651 | 26S proteasome non-ATPase regulatory subunit 14 (29) | XP_002284566.1 | 4.76 |
 387 | probable protein phosphatase 2C 58 (29) | XP_002275890.1 | 3.85 |
 137 | 26S proteasome non-ATPase regulatory subunit 4 (29) | XP_002264558.1 | 2.95 |
 352 | 60S ribosomal protein L10a-1-like (29) | XP_002274218.2 | 2.73 |
 696 | 60S ribosomal protein L23-like (29) | XP_002285443.1 | 2.69 |
 213 | uncharacterized protein At2g37660, chloroplastic (m.: 29) | XP_002267965.1 | 2.55 |
 190 | elongation factor 2-like isoform 1 (29) | XP_002266780.1 | 2.40 |
 266 | 60S ribosomal protein L11–1-like (29) | XP_002270266.1 | 2.34 |
 303 | serine carboxypeptidase-like 18 (29) | XP_002272116.1 | 2.27 |
 604 | probable glutamate carboxypeptidase 2-like isoform 1 (27, 29) | XP_002283565.2 | 2.20 |
 57 | hypothetical protein VITISV_003812 (60S acidic ribosomal protein P0) (29) | CAN80537.1 | 2.16 |
 543 | heme-binding protein 2-like (19, 29) | XP_002281829.1 | 2.10 |
 538 | cucumisin-like (29) | XP_002281790.2 | −2.07 |
 559 | serine carboxypeptidase II-3-like (29) | XP_002282331.1 | −2.38 |
 572 | ATP-dependent Clp protease proteolytic subunit 4, chloroplastic (29) | XP_002282652.1 | −2.43 |
 169 | 60S acidic ribosomal protein P2B isoform 1 (29) | XP_002266030.1 | −2.60 |
 2 | 40S ribosomal protein SA (29) | A5BUU4.1 | −3.26 |
 501 | eukaryotic translation initiation factor 3 subunit M (29) | XP_002280247.1 | −4.72 |
 633 | uncharacterized protein LOC100262703 (dipeptidyl-peptidase 5) (29) | XP_002284264.1 | −4.78 |
 616 | ADP-ribosylation factor-like protein 5 (29) | XP_002283837.1 | −4.88 |
 702 | probable protein phosphatase 2C 60 (29) | XP_002285549.1 | −4.97 |
 232 | protein transport protein SEC23-like (29) | XP_002268633.2 | −17.96 |
 518 | pyrrolidone-carboxylate peptidase isoform 4 (29) | XP_002280794.1 | d. |
 577 | subtilisin-like protease (29) | XP_002282841.1 | d. |
 578 | protein transport protein Sec24-like At3g07100-like (29) | XP_002282857.1 | d. |
 620 | aspartic proteinase nepenthesin-1-like (29) | XP_002283889.2 | d. |
Cell /Â signaling / development (30, 31, 33) | |||
 114 | 70 kDa peptidyl-prolyl isomerase (31) | XP_002263566.2 | new |
 250 | 11S globulin seed storage protein 2 (28, 33) | XP_002269868.1 | 50.05 |
 94 | peptidyl-prolyl cis-trans isomerase H (28, 33) | XP_002262773.1 | 25.35 |
 490 | PRA1 family protein F2-like (30, 31) | XP_002279772.1 | 13.62 |
 741 | coatomer subunit gamma-2-like (31) | XP_003631645.1 | 5.84 |
 644 | glutelin type-A 1 (28, 33) | XP_002284459.1 | 5.53 |
 685 | probable plastid-lipid-associated protein 6, chloroplastic (31) | XP_002285326.1 | 2.21 |
 45 | hypothetical protein VITISV_0120489 (plastid lipid-associated protein) (31) | CAN69132.1 | 2.15 |
 391 | tubulin alpha chain (31) | XP_002275973.1 | −2.05 |
 503 | syntaxin-71 (27, 31) | XP_002280272.1 | −3.77 |
 459 | PITH domain-containing protein At3g04780 (33) | XP_002278320.1 | d. |
Transport (34) | |||
 296 | V-type proton ATPase subunit H-like (34) | XP_002271887.1 | 5.21 |
 365 | V-type proton ATPase subunit E (29, 34) | XP_002274995.1 | 3.68 |
 358 | probable aquaporin PIP2–5 (34) | XP_002274555.1 | −3.94 |
Others (15, 18, 23, 24) | |||
 418 | ferritin-3, chloroplastic (15) | XP_002277114.1 | new |
 196 | selenium-binding protein 1 (15) | XP_002267004.1 | 10.44 |
 143 | soluble inorganic pyrophosphatase-like (23) | XP_002264695.2 | 2.20 |
 576 | nicotinate phosphoribosyltransferase-like (18, 23) | XP_002282786.1 | −6.86 |
 433 | probable carboxylesterase 15 (24) | XP_002277507.1 | −9.08 |
 332 | uracil phosphoribosyltransferase (23) | XP_002273489.1 | d. |
Hypothetical /Â Unknown function (35) | |||
 108 | uncharacterized protein At5g48480 (35) | XP_002263284.1 | 20.80 |
 733 | probable nucleoredoxin 1-like (35) | XP_003631263.1 | 8.46 |
 582 | elicitor-responsive protein 3 (35) | XP_002282926.1 | 4.99 |
 80 | unnamed protein product (35) | CBI34823.3 | 4.73 |
 771 | uncharacterized protein LOC100854733 (35) | XP_003634361.1 | 3.22 |
 98 | CBS domain-containing protein CBSX3, mitochondrial isoform 1 (35) | XP_002262902.1 | 2.02 |
 580 | uncharacterized protein LOC100259086 (35) | XP_002282908.1 | −2.08 |
 281 | nodal modulator 1 (35) | XP_002271147.1 | −2.24 |
 443 | transmembrane protein 111 (35) | XP_002277989.1 | −2.43 |
 343 | uncharacterized protein LOC100242710 (35) | XP_002273917.1 | −3.60 |
 164 | uncharacterized protein LOC100265424 (D-alanine--D-alanine ligase family protein) (35) | XP_002265851.1 | −3.64 |
 335 | S-norcoclaurine synthase (35) | XP_002273566.1 | −4.27 |
 48 | hypothetical protein VITISV_002394 (35) | CAN70694.1 | −4.82 |
 138 | non-lysosomal glucosylceramidase (35) | XP_002264575.2 | −5.50 |
 466 | clavaminate synthase-like protein At3g21360 (35) | XP_002278552.1 | −6.68 |
 40 | hypothetical protein VITISV_001156 (35) | CAN67361.1 | d. |
 547 | GDT1-like protein 4 (35) | XP_002281939.1 | d. |