Table 2 Statistics of the number of expressed genes and AS genes in the four samples from different peanut organs
From: Transcriptome analysis of alternative splicing in peanut (Arachis hypogaea L.)
Sample ID | Total detected genes (with count number ≥ 1) | Expressed Genes (with FPKM≥0.1) | AS genes (with FPKM≥0.1) | AS genes / Expressed genes (%) |
|---|---|---|---|---|
FH1-seed1 | 49,298 | 40,679 | 20,213 | 49.69% |
FH1-seed2 | 46,343 | 40,442 | 19,534 | 48.30% |
FH1-root | 46,982 | 41,780 | 19,326 | 46.26% |
FH1-leaf | 48,548 | 40,939 | 19,259 | 47.04% |
Total | 54,047 | 48,236 | 27,829 | 57.69% |