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Table 3 Statistical analysis of gene expression data

From: Diel pattern of circadian clock and storage protein gene expression in leaves and during seed filling in cowpea (Vigna unguiculata)

Field conditons Leaves Intermediate pods Immature pods
Pval Per Phase Amp Pval Per Phase Amp Pval Per Phase Amp
ELF3 0.00 18 0 0.75 1 18 15 0.15 1 18 0 0.45
GI 0.00 24 15 1.06 1 24 0 0.05 0.08 18 3 0.39
LHY 0.00 24 9 0.80 0.06 24 6 0.09 0.14 18 6 0.52
TOC1 0.00 18 3 0.12 0.00 24 3 0.15 1 18 3 0.04
LEG 0.03 24 9 0.14 0.00 24 0 0.06
LEGJ 0.12 18 3 0.09 0.52 24 9 0.01
CVC 1 18 12 0.05 0.14 18 12 0.01
  Mature pods Intermediate sedes Mature seeds
Pval Per Phase Amp Pval Per Phase Amp Pval Per Phase Amp
ELF3 0.01 18 9 0.34 0.08 18 3 0.76 0.07 24 21 0.13
GI 0.10 18 12 0.18 0.50 18 3 0.10 0.09 24 12 0.05
LHY 0.00 24 6 0.08 1.00 18 3 0.01 0.30 24 15 0.01
TOC1 0.00 24 6 0.11 0.21 18 3 0.25 0.04 24 18 0.24
LEG 0.58 24 12 0.08 0.25 18 0 0.16 0.55 24 0 0.04
LEGJ 0.00 18 6 0.14 0.14 18 12 4.13 0.00 24 9 33.33
CVC 0.00 24 6 0.04 1.00 18 9 5.17 0.04 24 9 18.54
12LD (48 h) Leaves Mature pods Mature seeds
  Pval Per Phase Amp Pval Per Phase Amp Pval Per Phase Amp
ELF3 0.07 27 24 1.21
GI 0.00 21 10.50 3.03 1 21 4.50 0.26 0.00 24 10.5 0.05
LHY 0.00 24 3 3.79 1 27 4.50 0.26 0.50 0 0 0
TOC1 0.00 24 18 0.54 1 21 1.50 0.47 1 21 13.50 0.00
LEG 1 27 3 0.00 1 24 15 0.00
LEGJ 1 27 7.50 0.07 0.13 27 24 18.90
CVC 1 27 4.50 0.16 0.07 27 28 14.22
12DD (24 h) Leaves Mature pods Mature seeds
  Pval Per Phase Amp Pval Per Phase Amp Pval Per Phase Amp
ELF3 0.00 24 9 16.63
GI 0.00 21 10.50 3.93 0.70 24 21 1.08 1 24 6 0.32
LHY 0.18 24 3 1 0.01 24 22.50 0.43 0.37 24 3 0.04
TOC1 0.51 24 15 1.12 1 21 6 1.86 1 24 9 0.23
LEG 1 21 0 0.12 1 21 1.50 0.00
LEGJ 0.24 24 3 0.65 0.81 21 15 6.46
CVC 0.30 24 3 0.46 1 21 15 10.69
  1. P value (Pval, significative if P < 0.05), period (Per), adjusted phase (Phases given by JTK_CYCLE and Lomb-Scargle need to be adjusted with their predicted period) and amplitude (Amp). Period is defined as the time between two consecutive peaks, phase is considered as the time point with the peak, amplitude is the difference between the peak (or minimum) and the mean value of the wave