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Table 2 Overview of transcripts from the Cufflinks assembly

From: The comparison of alternative splicing among the multiple tissues in cucumber

Tissue Transcripts Transcripts encoded by annotated genes Genes annotated
Ovary 39,133 26,515 18,373
Expanded ovary under fertilization 38,777 26,272 18,308
Expanded ovary not fertilized 39,255 27,175 18,485
Root 38,442 26,421 18,572
Stem 36,900 24,565 17,895
Leaf 38,176 25,666 18,243
Male flower 38,336 25,970 18,332
Female flower 38,879 26,491 18,478
Tendril 36,144 24,473 17,859
Base part of tendril 35,973 24,406 17,877