Table 3 Comparisons of the expression levels of representative differentially expressed genes involved in auxin metabolism. ‘ND’ represents not detected

Csa3G198490

ND

ND

1.84

2.45 E-03

Indole-3-acetic acid-amido synthetase GH3.1

Csa4G007100

2.53

1.07E-11

1.33

1.63 E-03

Indole-3-acetic acid-amido synthetase GH3.7

Csa6G493310

2.79

1.86E-08

ND

ND

indole-3-acetic acid-amido synthetase GH3.1

Csa1G025070

−1.24

7.86 E-06

−1.46

5.93E-08

Auxin efflux carrier component 1

Csa1G042820

−1.21

3.22 E-06

−1.05

3.58E-05

Auxin efflux carrier component 1

Csa4G430820

1.57

7.53 E-04

ND

ND

Auxin efflux carrier component 1c

Csa5G576590

ND

ND

−1.46

4.09E-08

Auxin efflux carrier component 3

Csa1G051690

1.99

4.17 E-03

ND

ND

Indole-3-acetic acid-induced protein ARG7

Csa5G534970

ND

ND

−1.89

9.77 E-04

Indole-3-acetic acid-induced protein ARG5

Csa6G452710

6.07

2.51 E-08

5.07

2.38E-17

Indole-3-acetic acid-induced protein ARG7

Csa1G207820

−1.51

4.6 E-05

−1.17

9.23E-05

Auxin-responsive protein IAA13

Csa1G397130

ND

ND

3.18

9.69E-06

Auxin-responsive protein IAA16

Csa2G059200

ND

ND

1.75

2.85 E-04

Auxin-responsive protein IAA33

Csa2G170820

ND

ND

−1.79

1.11E-11

Auxin-responsive protein IAA13

Csa2G200420

−1.42

7.4 E-03

ND

ND

Auxin-responsive protein

Csa3G134550

ND

ND

−1.25

4.61E-05

Auxin-responsive protein IAA13

Csa3G143580

−1.09

3.23 E-03

ND

ND

Auxin-responsive protein IAA4

Csa3G877650

−1.22

7.92E-04

ND

ND

Auxin-responsive protein IAA29

Csa6G497220

1.11

1.13 E-04

ND

ND

Auxin-responsive protein IAA9

Csa2G258720

−2.56

4.09 E-03

ND

ND

Auxin-induced protein 6B

Csa2G258760

2.62

7.53 E-05

ND

ND

Auxin-induced protein X10A

Csa2G379350

ND

ND

−1.85

4.50 E-06

Indole-3-pyruvate monooxygenase YUCCA4

Csa3G118740

−1.09

2.65 E-05

−1.42

8.34E-08

Auxin-induced protein X15

Csa3G171820

−1.03

1.83 E-03

ND

ND

Auxin-induced protein

Csa3G821040

ND

ND

3.89

3.09E-06

Auxin-regulated gene

Csa3G866530

ND

ND

2.64

2.66 E-04

Auxin-induced protein 6B

Csa3G883020

ND

ND

2.34

1.07 E-04

Auxin-induced protein 6B

Csa4G308640

ND

ND

−1.20

3.00E-06

Auxin transporter-like protein 4

Csa4G433470

ND

ND

3.85

1.35E-06

Auxin-regulated gene I

Csa4G556180

−1.55

5.03 E-04

−2.02

3.41E-09

Auxin-induced protein 6B OS

Csa5G623890

ND

ND

1.52

1.10 E-04

Auxin-regulated gene

Csa6G092560

2.32

1.22E-10

2.08

1.54E-16

Auxin-induced protein 15A

Csa6G291920

−1.11

3.99 E-06

−1.10

1.72E-05

Auxin response factor 4

Csa6G518000

−1.44

3.09 E-03

ND

ND

Auxin-repressed 12.5 kDa protein

Csa6G518210

−1.07

1.81 E-05

−1.07

6.00E-05

Auxin response factor 3

Csa7G008430

1.19

4.21 E-04

ND

ND

Auxin-induced protein 15A

Csa7G009020

−2.40

4.67 E-05

ND

ND

Auxin-induced protein X10A

Csa7G009150

2.50

1.39 E-05

2.54

2.40 E-04

Auxin-induced protein 10A5

Csa7G010800

ND

ND

−1.30

1.71E-06

Auxin transporter-like protein 5

Csa7G329330

−1.20

5.00 E-06

−1.33

2.39 E-03

Auxin response factor 9

Csa7G378520

−1.34

2.39 E-03

ND

ND

Auxin-induced protein AUX28

Csa7G448680

2.92

6.39E-15

1.68

4.30E-05

Auxin responsive protein