Skip to main content

Table 1 Cotton genome assemblies included in CottonFGD

From: CottonFGD: an integrated functional genomics database for cotton

Speciesa Date Provider Assembly Size (Mb) Chromosome Numberb Annotated Genes
Diploid
G. raimondii (Ulbr.) Joint Genome Institute (JGI) [1] 761.4 13 (+1020) 37,505
G. raimondii (D5–3) Beijing Genome Institute (BGI) [2] 775.2 13 (+4434) 40,976
G. arboreum (Shixiya1) Beijing Genome Institute (BGI) [3] 1694.6 13 (+75,581) 41,331
Tetraploid
G. hirsutum (Tm-1) Nanjing Agricultural University (NAU) [7] 2447.0 26 (+38,951) 70,478
G. hirsutum (Tm-1) Beijing Genome Institute (BGI) [4] 2150.9 26 (+9128) 76,943
G. barbadense (Xinhai-21) Nanjing Agricultural University (NAU) [5] 2263.5 26 (+2013) 77,358
  1. aSequenced strains are listed in brackets.
  2. bUnplaced scaffold numbers are listed in brackets