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Table 1 Summary of RNA–seq and de novo assembly of P. armeniaca L. unigenes

From: Comparative transcriptome profiling and morphology provide insights into endocarp cleaving of apricot cultivar (Prunus armeniaca L.)

Sequence Number
Total nucleotides 40,145,230,606
Numbers of clean reads 159,378,508
Numbers of 200–300 bp contigs 17,108,433 (99.71%)a
Mean length of contigs (bp) 39.07
N50 length of contigs (bp) 42
Numbers of ≥200 bp transcripts 152,146 (99.99%)b
Mean length of transcripts (bp) 1579.75
N50 length of transcripts (bp) 2598
Numbers of unigenes 63,170
Mean length of unigenes (bp) 868.72
N50 length of unigenes (bp) 1689
  1. aThe proportion of contigs (length 200–300 bp) to total contigs (17,158,454)
  2. bThe proportion of transcripts (length ≥ 200 bp) to total transcrips (152,146)