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Fig. 5 | BMC Plant Biology

Fig. 5

From: Comparative RNA-seq based transcriptomic analysis of bud dormancy in grape

Fig. 5

Verification of relative expression levels of DEGs by qRT-PCR. Error bars indicate standard deviation from 3 biological and technical replicates of RT-qPCR. Expression patterns of 12 DEGs related to plant hormone signal transduction pathway by qRT-PCR (blue bar) and RNA-Seq (red line). (1) Gene ID: LOC100240944, Gene Name: protein phosphatase 2C 49 –like, Gene, Locus ID: VIT_00017639001, (2) Gene ID: LOC100248525, Gene Name: protein phosphatase 2C 25- like, Locus ID: VIT_00032793001, (3) Gene ID: LOC100264240, Gene Name: carboxylesterase 2, (4) Gene ID: LOC100260853, Gene Name: carboxylesterase 8, Locus ID: VIT_00027568001 (5) Gene ID: LOC100249257, Gene Name: carboxylesterase 120, Locus ID: VIT_00010672001 (6) Gene ID: LOC100254982, Gene Name : corboxyleterase1-like, (7) Gene ID: LOC100260659, Gene Name: carboxylesterase 12,Locus ID: VIT_00031776001, (8) Gene ID: LOC100244884, Gene Name: corboxyleterase 6, Locus ID: VIT_00025780001, (9) Gene ID: LOC100264381, Gene Name: protein phosphatase 2C 40, Locus ID: VIT_00001129001, (10) Gene ID: LOC100242244, Gene Name: protein phosphatase 2C 15-like, Locus ID: VIT_00011853001, (11) Gene ID: LOC100253351, Gene Name: Protein kinase and PP2C-like, Locus ID: VIT_00025802001, (12) Gene ID: LOC100263197, Gene Name: Protein short root transcript varient X2, Locus ID: VIT_00000107001, (13) Gene ID: LOC100246825, Gene Name: Vv Actin (Reference gene), Locus ID: VIT_00003099001

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