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Table 1 Summary of genes retained in the M. hypopitys plastome

From: The loss of photosynthetic pathways in the plastid and nuclear genomes of the non-photosynthetic mycoheterotrophic eudicot Monotropa hypopitys

Function Genes
Ribosomal proteins (large subunit) rpl2, rpl14, rpl16, rpl20, rpl22, rpl23, rpl32, rpl33, rpl36
Ribosomal proteins (small subunit) rps2, rps3, rps4, rps7, rps8, rps11, rps12, rps14, rps18
rRNAs rrn4.5, rrn5, rrn16, rrn23
tRNAs trnH-GUG, trnW-CCA, trnP-UGG, trnfM-CAU a , trnF-GAA, trnS-UGA, trnM-CAU b , trnE-UUC, trnY-GUA, trnD-GUC, trnC-GCA, trnR-UCU, trnS-GCU, trnQ-UUG, trnI-CAU, trnR-ACG, trnN-GUU, trnL-UAG, trnF-AAA c
Other protein-coding genes infA, matK, clpP, accD d
  1. a two copies in MON1 and one copy in MON2 plastome
  2. b missing in MON2 plastome
  3. c missing in MON1 plastome
  4. d functionality is unclear