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Table 1 Identification of differentially expressed proteins spots from 2-DE gels

From: Integrated analysis of gene expression from carbon metabolism, proteome and metabolome, reveals altered primary metabolism in Eucalyptus grandis bark, in response to seasonal variation

Spot n° Protein Protein score Coverage % Sequence N° of Peptides Fold change (summer/winter)
  1.1.1.2 C1 Metabolism      
 21 RuBisCO large subunit-binding 410 11 % Egrandis_v1_0.005399 m 6 0.4
 58 Ribulose bisphosphate carboxylase large chain 325 15 % RBL_ANTFO 6 0.54
 59 RuBisCO large subunit-binding 263 13 % Egrandis_v1_0.005399 m 4 0.74
 73 Formate dehydrogenase 1297 39 % Egrandis_v1_0.015998 m 11 1.93
 7 Phosphoglycerate kinase 3928 58 % Egrandis_v1_0.014782 m 16 0.48
  1.1.2 Energy Metabolism (Carbon)      
 8 Enolase 122 5 % Egrandis_v1_0.021648 m 1 0.46
 14 Phosphoglycerate kinase 1681 46 % Egrandis_v1_0.014782 m 12 0.3
 51 Phosphoglycerate kinase 1452 32 % Egrandis_v1_0.014782 m 8 0.4
 52 Enolase 128 3 % Egrandis_v1_0.010202 m 5 3.77
 60 Triosephosphate isomerase 1092 45 % Egrandis_v1_0.020110 m 9 0.56
 101 Enolase 1610 19 % ENO1_HEVBR 6 1.33
 114 Enolase 929 15 % ENO1_HEVBR 4 0.43
  1.1.3 Energy Transfer/Atp-Proton Motive Force      
 3 HSP20-like chaperones superfamily protein 153 28 % Egrandis_v1_0.029820 m 2 3.98
 25 ATPase, V1 complex, subunit B 964 27 % Egrandis_v1_0.010528 m 10 0.35
 30 ATP synthase alpha/beta family protein 1664 51 % Egrandis_v1_0.007569 m 17 0.36
 46 Citrate synthase 286 21 % Egrandis_v1_0.011280 m 7 1.85
 91 Citrate synthase 523 18 % Egrandis_v1_0.011280 m 5 1.56
 97 Malate dehydrogenase 1094 30 % Egrandis_v1_0.018951 m 6 0.62
  1.2.1 Amino AcidMetabolism      
 71 Phosphoglycerate dehydrogenase 456 35 % Egrandis_v1_0.014972 m 7 0.54
  1.2.3 Nucleotide/Nucleoside and Nucleotide Sugar Metabolism      
 2 UDP-sugar pyrophosphorylase 395 10 % Egrandis_v1_0.005961 m 3 0.48
 41 Adenosinekinase 1965 45 % Egrandis_v1_0.018389 m 10 1.96
 61 UDP-glucose pyrophosphorylase 89 6 % Egrandis_v1_0.011888 m 2 2.08
 63 UDP-glucose dehydrogenase 554 22 % Egrandis_v1_0.010940 m 6 1.9
 103 UDP-glucose pyrophosphorylase 621 32 % Egrandis_v1_0.011888 m 7 0.49
 106 UDP-glucose pyrophosphorylase 1187 41 % Egrandis_v1_0.011888 m 13 0.46
  1.2.8 Secondary Metabolism      
 87 NAD(P)-linked oxidoreductase 445 24 % Egrandis_v1_0.019083 m 5 2.05
 96 Phenylcoumaranbenzylicether reductase 2400 76 % Egrandis_v1_0.020543 m 15 0.45
  2.1 Cell Processes      
 78 Vacuolar H + -ATPasecatalyticsubunit 933 20 % Egrandis_v1_0.006156 m 8 0.41
 70 14-3-3 protein 654 26 % Egrandis_v1_0.043757 m 6 0.45
 123 14-3-3- protein 1031 39 % Egrandis_v1_0.023614 m 7 0.49
  2.2.2 Protection Responses/Detoxification      
 1 Ascorbate peroxidase 1788 41 % Egrandis_v1_0.024254 m 6 4.71
 24 Peroxidase 209 9 % gi|242089639 2 1.9
 31 Ascorbate peroxidase 84 7 % Egrandis_v1_0.024254 m 1 0.64
 33 Ascorbate peroxidase 1406 41 % Egrandis_v1_0.024164 m 6 0.49
 45 Ascorbateperoxidase 121 10 % Egrandis_v1_0.024164 m 1 1.93
 47 Glutathioneperoxidase 75 8 % Egrandis_v1_0.024172 m 2 4.22
 69 Glutathione S-transferase, C-terminal-like 157 8 % Egrandis_v1_0.022631 m 2 0.52
 74 Ascorbateperoxidase 1624 57 % Egrandis_v1_0.024217 m 6 4.11
 79 Ascorbateperoxidase 1447 51 % Egrandis_v1_0.024254 m 7 3.28
 99 Ascorbateperoxidase 200 14 % Egrandis_v1_0.024254 m 2 2.32
 107 Copper/zinc-superoxidedismutase 296 19 % Egrandis_v1_0.029096 m 2 1.42
  2.2.3.2 Abiotic      
 90 Late embryogenesisabundantprotein 1384 43 % Egrandis_v1_0.020038 m 13 0.55
  4.1.2.4 LigninMetabolism      
 105 Caffeicacid 3-O-methyltransferase 383 31 % COMT1_EUCGU 7 0.49
 124 Caffeicacid 3-O-methyltransferase 328 3 % Egrandis_v1_0.003388 m 6 0.57
  4.1.2.5 Expansins, Xetand Extensin      
 54 Major Latex protein MLP-like 1055 50 % Egrandis_v1_0.029781 m 6 0.71
 95 Major Latex protein (MLP-like) 792 55 % Egrandis_v1_0.029781 m 6 0.83
  4.3 Cytoskeleton      
 17 Beta-tubulin 267 13 % Egrandis_v1_0.012369 m 4 0.42
 102 Beta-tubulin 1533 27 % Egrandis_v1_0.012451 m 11 0.46
 111 Beta-tubulin 2034 34 % Egrandis_v1_0.012369 m 15 0.79
  5.2 Rna Related      
 44 Glycine-rich RNA-binding protein 283 21 % Egrandis_v1_0.020038 m 4 0.36
  5.3.3 Translation Related      
 66 Eukaryoticinitiationfactor 381 9 % Egrandis_v1_0.014208 m 3 2.56
 75 Elongationfactor 1 beta 684 14 % Egrandis_v1_0.021389 m 3 0.34
 84 Eukaryoticinitiationfactor 1471 41 % Egrandis_v1_0.014208 m 13 1.83
  5.3.5 Protein Folding/Chaperoning      
 4 Heatshockproteins 565 28 % Egrandis_v1_0.021389 m 5 1.58
 11 Heatshockprotein 2052 28 % Egrandis_v1_0.044829 m 15 2.53
 13 Heatshockprotein 230 13 % Egrandis_v1_0.027871 m 2 0.32
 40 Heat shock cognate 70 kDa protein 1888 31 % Egrandis_v1_0.003388 m 18 2.72
 57 Heatshockproteinmitochondrial 385 21 % Egrandis_v1_0.026204 m 3 1.89
 62 Heatshockprotein (HSP20) 1331 50 % Egrandis_v1_0.045806 m 9 2.99
 67 Heatshockprotein 157 15 % Egrandis_v1_0.029182 m 2 4.11
 76 Heatshockprotein (Hsp20) 1589 26 % Egrandis_v1_0.021389 m 7 1.52
 82 Heatshock 70 kDaprotein 3155 44 % Egrandis_v1_0.005502 m 23 3.84
 94 Heatshockprotein 810 34 % Egrandis_v1_0.029182 m 5 1.54
 98 Heatshockprotein (HSP20) 363 23 % Egrandis_v1_0.026663 m 4 1.8
 104 Heatshockprotein 383 18 % Egrandis_v1_0.026663 m 5 1.99
 112 Heatshockprotein 2682 47 % Egrandis_v1_0.025526 m 9 0.53
 118 Heatshockcognate 70 kDa 1292 24 % Egrandis_v1_0.003884 m 14 0.53
 120 Heatshockprotein 1010 22 % Egrandis_v1_0.044829 m 11 1.84
 125 Heat shock 70 kDa protein, mitochondrial 1413 29 % Egrandis_v1_0.004853 m 13 1.66
  5.3.6 Protein Cleavage and Turnover      
 42 Proteasomalregulatoryprotein 187 14 % Egrandis_v1_0.018412 m 4 1.97
 55 Proteasomesubunit beta type 1215 34 % Egrandis_v1_0.021324 m 7 1.78
 68 26S proteasome non-ATPase regulatory particle 533 28 % Egrandis_v1_0.023175 m 4 0.63
  6.2 Putative Protein      
 116 NAD(P)-binding Rossmann-fold superfamily protein 386 21 % Egrandis_v1_0.018330 m 6 0.72