Table 3 Single nucleotide polymorphism (SNP) markers significantly (P < 0.001) associated with stem rust resistance at two growth phases (HA and SM) using mixed linear model (MLM)
From: Genome-wide association study on stem rust resistance in Kazakh spring barley lines
Marker | Phase | Chr. | cM | P | R2 | Allele | MAF, % | Effect |
|---|---|---|---|---|---|---|---|---|
SCRI_RS_216088 | HA | 1H | 122,2 | 6.1764E-4 | 0.13839 | T/C | C(0.12) | C(1.09) |
BOPA1_7370-818 | HA | 6H | 63,5 | 2.9592E-4 | 0.15583 | G/A | A(0.14) | A(1.18) |
SCRI_RS_152841 | HA | 6H | 63,5 | 2.9592E-4 | 0.15583 | A/C | C(0.14) | A(−1.18) |