Table 2 Summary of Illumina sequencing and mapping of the sequencing read to the genes in the high confidence gene set
Total reads | Total mapped reads | % mapped readsa | # uniquely mapped reads | % uniquely mapped readsb | |
|---|---|---|---|---|---|
520 leaves WW | 208,238,566 | 85,078,408 | 40.86 | 84,848,522 | 99.73 |
520 roots WW | 177,073,828 | 70,448,906 | 39.79 | 70,245,780 | 99.71 |
520 leaves drought | 223,031,526 | 111,012,324 | 49.77 | 110,732,434 | 99.75 |
520 roots drought | 170,916,478 | 70,687,714 | 41.36 | 70,463,550 | 99.68 |
592 leaves WW | 202,996,992 | 96,790,050 | 47.68 | 96,548,610 | 99.75 |
592 roots WW | 185,878,236 | 90,739,420 | 48.82 | 90,492,450 | 99.73 |
592 leaves drought | 234,211,410 | 63,601,116 | 27.16 | 63,220,510 | 99.40 |
592 roots drought | 178,929,458 | 52,870,112 | 29.55 | 52,564,102 | 99.42 |
Total | 1,581,276,494 | 641,228,050 | 40.55 | 639,115,958 | 99.67 |