Table 2 Relative synonymous codon usage (RSCU) for protein-coding genes in Ananas comosus

UGA

*

26

0.772

UAG

*

31

0.921

UAA

*

44

1.307

GCU

A

630

1.819

GCG

A

151

0.436

GCC

A

210

0.606

GCA

A

394

1.138

UGU

C

246

1.46

UGC

C

91

0.54

GAU

D

914

1.616

GAC

D

217

0.384

GAG

E

414

0.563

GAA

E

1058

1.438

UUU

F

921

1.205

UUC

F

607

0.795

GGU

G

611

1.336

GGG

G

298

0.652

GGC

G

157

0.343

GGA

G

763

1.669

CAC

H

157

0.463

CAU

H

521

1.537

AUU

I

1120

1.431

AUA

I

715

0.914

AUC

I

513

0.655

AAA

K

1026

1.456

AAG

K

383

0.544

CUA

L

409

1.169

CUC

L

214

0.612

CUG

L

177

0.506

CUU

L

599

1.713

UUA

L

838

1.17

UUG

L

594

0.83

AUG

M

656

1

AAC

N

298

0.461

AAU

N

996

1.539

CCA

P

340

1.195

CCC

P

231

0.812

CCU

P

425

1.494

CCG

P

142

0.499

CAA

Q

721

1.488

CAG

Q

248

0.512

AGA

R

548

1.524

AGG

R

171

0.476

CGA

R

369

1.525

CGC

R

96

0.397

CGG

R

137

0.566

CGU

R

366

1.512

AGC

S

108

0.409

AGU

S

420

1.591

UCA

S

458

1.129

UCC

S

374

0.922

UCG

S

198

0.488

UCU

S

593

1.461

ACC

T

263

0.739

ACA

T

438

1.23

ACG

T

163

0.458

ACU

T

560

1.573

GUU

V

525

1.425

GUG

V

207

0.562

GUC

V

188

0.51

GUA

V

554

1.503

UGG

W

468

1

UAC

Y

218

0.424

UAU

Y

811

1.576