Fig. 5

Transcript expression of Tulsi Krishna and Rama subtypes are expressed as RPKM values. Highly significant differentially abundant RNA scaffolds/transcripts were defined to have RPKM of atleast 5 in both and the fold-change difference between two subtypes should be atleast 8 times. Only the transcripts, for which the 95 % lower-confidence-bound of more abundant subtype and 95 % upper-confidence-bound of less abundant subtype, and had at least 8 times difference, were retained. Of these differentially abundant transcripts, top-50 in Krishna and Rama subtype were plotted in the form of heat-map. a. Differentially more abundant transcripts in Krishna. b. Differentially more abundant transcripts in Rama. (please look in Additional file 24: Text B and C for transcript IDs for a. and b)