Table 7 Interaction for effects of combinations of presence (+) and absence (−) of nuclear markers with presence (+) or absence (−) of D-type cytoplasm on resistance to late blight and plant maturity in the PIN184 population. In case significant differences were found among marker classes, two-way ANOVA was performed to explore the factors contributing the differences
From: Cytoplasmic genome types of European potatoes and their effects on complex agronomic traits
Marker combination | Marker class | Maturity corrected resistance (MCR) | Relative area under disease progress curve (rAUDPC) | Plant maturity (PM) | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
n | Mean (SD) | Welch’s test | Two-way ANOVA | n | Mean (SD) | Welch’s test | Two-way ANOVA | n | Mean (SD) | Welch’s test | Two-way ANOVA | ||
R3a/D | +/+ | 32 | −0.01 (0.077) | *** | D*** | 32 | 0.37 (0.096) | *** | D*** | 32 | 5.6 (1.26) | ns |  |
|  | −/+ | 33 | −0.04 (0.071) |  |  | 33 | 0.32 (0.076) |  | R3a* | 33 | 5.2 (1.28) |  |  |
|  | +/− | 39 | 0.02 (0.056) |  |  | 39 | 0.40 (0.078) |  |  | 39 | 5.8 (1.41) |  |  |
|  | −/− | 79 | 0.03 (0.071) |  |  | 79 | 0.40 (0.081) |  |  | 79 | 5.5 (1.33) |  |  |
R3b/D | +/+ | 53 | −0.02 (0.076) | *** | D*** | 53 | 0.34 (0.092) | *** | D*** | 53 | 5.5 (1.23) | ns |  |
|  | −/+ | 12 | −0.02 (0.074) |  |  | 12 | 0.33 (0.078) |  |  | 12 | 4.9 (1.44) |  |  |
|  | +/− | 64 | 0.01 (0.059) |  |  | 64 | 0.39 (0.081) |  |  | 64 | 5.8 (1.45) |  |  |
|  | −/− | 54 | 0.04 (0.071) |  |  | 54 | 0.41 (0.078) |  |  | 54 | 5.4 (1.23) |  |  |
CosA210/D | +/+ | 16 | −0.01 (0.062) | *** | D* | 16 | 0.33 (0.060) | *** | D** | 16 | 4.7 (0.98) | * | D** |
|  | −/+ | 49 | −0.03 (0.079) |  | CosA210 × D* | 49 | 0.35 (0.097) |  |  | 49 | 5.6 (1.29) |  | CosA210 × D** |
|  | +/− | 23 | 0.00 (0.077) |  |  | 23 | 0.38 (0.092) |  |  | 23 | 6.1 (1.30) |  |  |
|  | −/− | 95 | 0.04 (0.062) |  |  | 95 | 0.40 (0.076) |  |  | 95 | 5.5 (1.35) |  |  |
StAOS2_SNP691/692 (AC haplotype)a/D | +/+ | 60 | −0.03 (0.075) | *** | StAOS2_SNP691/692** | 60 | 0.33 (0.086) | *** | StAOS2_SNP691/692*** | 60 | 5.3 (1.26) | ** | StAOS2_SNP691/692** |
−/+ | 3 | 0.06 (0.017) |  | 3 | 0.48 (0.026) |  | 3 | 6.9 (1.09) |  | ||||
+/− | 108 | 0.02 (0.066) |  |  | 108 | 0.39 (0.077) |  | 108 | 5.5 (1.31) |  |  | ||
|  | −/− | 8 | 0.07 (0.076) |  |  | 8 | 0.48 (0.059) |  | 8 | 6.6 (1.16) |  |  | |