From: Characterization of the cork oak transcriptome dynamics during acorn development
Cluster | Transcript name | At Locus | At homologous | Annotation | counts | SEFa | ||||
---|---|---|---|---|---|---|---|---|---|---|
 |  |  |  |  | S1 | S2 | S3S4 | S5 | S8 |  |
A | Contig16112 | AT2G47000 | MDR4, PGP4, ABCB4 | Multidrug resistance 4, P-glycoprotein 4, ATP binding cassette subfamily B4 | 19.8 | 0 | 0.6 | 0.4 | 0 | 0.95 |
A | Qs-dev_rep_c84235 | AT3G17000 | UBC32 | Ubiquitin-conjugating enzyme 32 | 25 | 0 | 1.2 | 0 | 1.2 | 0.91 |
B | Contig18768 | AT3G23920 | BAM1 | β-Amylase 1 | 1.2 | 29.6 | 0.6 | 1.2 | 2.2 | 0.85 |
Qs-dev_rep_c76744 | 0.4 | 54.2 | 0.2 | 8.4 | 0.8 | 0.85 | ||||
C | Qs-dev_rep_c77033 | AT5G25610 | RD22 | Responsive to desiccation 22 | 0.4 | 0 | 34.4 | 0 | 3.6 | 0.90 |
D | Contig17288 | AT3G30775 | ERD5, PRODH, ATPOX, ATPDH, PRO1, PDH1 | Methylenetetrahydrofolate reductase family protein | 0 | 0 | 0 | 22 | 15 | 0.59 |
D | Qs-dev_rep_c76415 | AT3G29320 | PHS1 | Glycosyl transferase | 0.4 | 0.6 | 0.2 | 25.4 | 16.6 | 0.59 |
D | Contig19318 | AT3G24650 | ABI3 | AP2/B3-like transcriptional factor family protein | 0 | 0 | 7.2 | 66.8 | 42.2 | 0.57 |
E | Contig19981 | AT2G41430 | ERD15, LSR1, CID1 | Dehydration-induced protein (ERD15) | 0 | 2.2 | 0.6 | 25.8 | 37.2 | 0.96 |
F | Contig18471 | AT5G59320 | LTP3 | Lipid transfer protein 3 | 0 | 0.2 | 0 | 5.6 | 38.6 | 0.87 |
F | Contig16935 | AT4G15910 | DI21 | Late embryogenesis abundant protein Lea5; drought-induced 21 | 1.2 | 0 | 3.6 | 18.8 | 179.2 | 0.88 |
Qs-dev_c42419 | 0 | 0 | 0 | 0 | 16.4 | 1 | ||||
F | Contig18808 | AT5G06760 | LEA4-5 | Late embryogenesis abundant 4-5 | 1.2 | 2.2 | 0.6 | 0.4 | 53 | 0.92 |
F | Contig17917 | AT3G50980 | XERO1 | Dehydrin xero1 | 3 | 0.8 | 0.6 | 3.4 | 50.8 | 0.87 |
F | Contig19993 | AT1G05680 | UGT74E2 | Uridine diphosphate glycosyltransferase 74E2 | 0 | 0.8 | 0 | 4.2 | 33.8 | 0.87 |
F | Qs-dev_rep_c73281 | AT3G15353 | MT3 | Metallothionein 3 | 0.4 | 3 | 0.2 | 4.6 | 75 | 0.90 |
Qs-dev_rep_c79475 | 0.4 | 0 | 0.2 | 0.8 | 18.8 | 0.93 |