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Table 3 Analysis of transcript abundance changes of genes encoding β-glucosidases

From: Substantial reprogramming of the Eutrema salsugineum (Thellungiella salsuginea) transcriptome in response to UV and silver nitrate challenge

Transcript ID

Best Ath hit

Gene symbol

UV

Ag +

Fold change log2 (UV/n.i.)

FDR-p-value test

Fold change log2 (Ag/n.i.)

FDR-p-value test

RNAseq Unique reads

  

n.i.

UV

AgNO3

Thhalv10006515m

AT4G27830.1

BGLU10

up

 

1,80

0,001

−1,56

0,000

3

30

6

Thhalv10006510m

AT4G27830.1

BGLU10

up

 

1,42

0,000

−1,94

0,000

40

389

105

Thhalv10005908m

AT4G27830.1

BGLU10

down

 

−2,08

0,000

−1,85

0,000

217

127

587

Thhalv10001447m

AT2G44450.1

BGLU15

up

up

1,14

0,003

2,08

0,000

2

20

29

Thhalv10011384m

AT1G52400.1

BGLU18

down

up

−5,32

0,000

0,47

0,000

4823

2272

195299

Thhalv10011385m

AT1G52400.1

BGLU18

  

−7,87

0,000

0,41

0,279

2

6

1246

Thhalv10020508m

AT3G09260.1

BGLU23,PYK10

 

up

0,18

0,650

1,20

0,045

19

106

861

Thhalv10020496m

AT3G03640.1

BGLU25,GLUC

 

up

−0,13

0,582

1,46

0,001

415

811

1634

Thhalv10001354m

AT2G44490.1

BGLU26,PEN2

up

up

1,94

0,000

1,70

0,000

2401

11117

21129

Thhalv10002501m

AT4G22100.1

BGLU3

  

−1,19

0,036

−0,22

0,547

2

20

542

Thhalv10004297m

AT4G22100.1

BGLU3

down

down

−1,30

0,000

−2,00

0,000

11

3

8

Thhalv10028552m

AT4G22100.1

BGLU3

  

−1,85

0,000

−1,19

0,000

85

89

170

Thhalv10002493m

AT4G22100.1

BGLU3

down

 

−2,57

0,000

−1,31

0,001

100

92

571

Thhalv10005858m

AT3G60140.1

BGLU30,SRG2

 

up

0,50

0,566

6,19

0,000

5

18

344

Thhalv10018387m

AT5G24550.1

BGLU32

up

up

5,96

0,000

6,62

0,000

729

31451

52650

Thhalv10002474m

AT5G26000.1

BGLU38,TGG1

  

−0,37

0,529

−0,38

0,598

7

0

2

Thhalv10004165m

AT5G26000.1

BGLU38,TGG1

  

−0,68

0,303

−0,73

0,375

11

1

2

Thhalv10003954m

AT5G26000.1

BGLU38,TGG1

  

−1,29

0,085

−0,88

0,219

6

0

10

Thhalv10007404m

AT1G26560.1

BGLU40

up

up

2,11

0,000

2,54

0,000

167

652

1015

Thhalv10027734m

AT5G36890.1

BGLU42

down

 

−1,09

0,000

0,24

0,001

773

351

731

Thhalv10020536m

AT3G18080.1

BGLU44

  

1,81

0,002

1,01

0,006

8

5

3

Thhalv10023411m

AT1G61820.1

BGLU46

up

up

2,81

0,005

7,02

0,000

1

157

964