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Table 4 The selected predictions dataset

From: Ontology-oriented retrieval of putative microRNAs in Vitis vinifera via GrapeMiRNA: a web database of de novo predicted grape microRNAs

Total number of predictions

5,778

Position assembled precursors

4,330

Homology assembled precursors

2,575

Target ranking groups

3,616

Position in precursor

5'end: 2,926

3'end: 2,852

Strand

+ strand: 2,642

- strand: 3,136

PrecExtract vs Arabidopsis genome

354

Mature miRNA homologues to Arabidopsis genome (BLAST analysis)

218

PrecExtract vs Genoscope grape genome

691

Mature miRNA homologues to Genoscope grape genome (BLAST analysis)

173

BLAST homologues to grape ESTs

359

  1. Composition of the dataset included in the selected_predictions table. Selected predictions are available at the GrapeMiRNA web site.