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Table 5 Hormone related genes

From: Transcriptomic analysis of tomato carpel development reveals alterations in ethylene and gibberellin synthesis during pat3/pat4 parthenocarpic fruit set

Array probe set

Gen description

Assigned SGN

RP75/59 Ant_E

UC82 Ant_E

RP75/59 3DPA_E

UC82 3DPA_E

ABCISIC ACID

Ā Ā Ā Ā Ā Ā 

Les.5830.1.S1_at

Protein kinase (signaling)

SGN-U322602

9.5

9.6

9.36

8.76

LesAffx.8142.1.S1_at

Abscisic acid-induced protein

SGN-U321021

10.77

10.92

10.43

9.86

Les.4655.1.S1_at

MOSC domain protein (synthesis-degradation)

SGN-U315128

12.04

12.54

10.89

10.59

Les.112.1.S1_at

ABA1 zeaxanthin epoxidase (synthesis-degradation)

SGN-U321035

10.07

11.04

9.19

8.83

AUXIN

Ā Ā Ā Ā Ā Ā 

LesAffx.49488.1.S1_at

Auxin-responsive family protein (signaling)

Ā 

4.66

5.7

4.17

4.19

Les.3489.1.S1_at

Aminopeptidase p (transport)

SGN-U321375

10.29

10.42

9.89

9.55

Les.4501.1.S1_at

Auxin-induced protein

SGN-U313066 SGN-U334111

4.88

4.91

4.93

6.8

Les.5138.1.S1_at

Auxin-induced protein

SGN-U316711

10.55

10.38

9.43

10.43

LesAffx.2303.1.S1_at

Highlyauxin-induced protein (aldo keto reductase family)

Ā 

8.09

8.32

7.41

6.61

Les.4383.1.S1_at

Metallocarboxypeptidase inhibitor (response)

SGN-U338720 SGN-U314263

13.34

11.82

13.89

10.87

Les.3707.1.A1_at

Auxin-responsive protein IAA2 (response)

SGN-U339965

4.49

4.5

4.75

5.34

Les.3707.1.S1_at

Auxin-responsive protein IAA2 (response)

SGN-U339965

4.61

4.45

5.86

8.01

Les.3702.1.S1_at

Auxin-regulated protein IAA10 (response)

SGN-U323974

5.1

4.75

5.75

4.81

Les.5154.1.S1_at

Vesicle-associated membranesynaptobrevin 7b (response)

SGN-U316860

12.18

12.46

11.76

11.62

Les.5312.1.S1_at

GH3-like protein (response)

SGN-U331710

8.35

9.65

6.83

7.39

LesAffx.67531.1.S1_at

AXR2| IAA7 (response)

Ā 

4.79

4.08

6.15

8.74

ETHYLENE

Ā Ā Ā Ā Ā Ā 

Les.354.1.S1_at

KNAT3 homeodomain protein (detection)

Ā 

10.41

10.76

9.86

9.33

Les.5917.1.S1_at

ACC oxidase ACO5 (synthesis-degradation)

SGN-U323861

6.95

5.2

4.99

4.68

Les.5312.1.S1_at

GH3-like protein (ethylene-dependent resistance)

SGN-U331710

8.35

9.65

6.83

7.39

Les.5841.1.S1_at

3-keto-acyl-thiolase 2 (ethylene-dependent resistance)

SGN-U312631

10.87

11.59

10.08

10.4

Les.4233.1.S1_at

Universal stress proteinfamily protein (induced)

SGN-U315394 SGN-U315393

5.23

7.24

4.82

4.5

GIBBERELLIN

Ā Ā Ā Ā Ā Ā 

Les.3625.1.S1_at

GASA5-like protein (induced)

SGN-U313658 SGN-U334522

9.97

10.58

9.48

11

LesAffx.9038.1.S1_at

DWARF3 (synthesis-degradation)

SGN-U334242

12.76

11.39

13.11

12.88

Les.5621.1.S1_at

GA2-oxidase (synthesis-degradation)

SGN-U325681

6.05

6.22

7.41

8.1

Les.63.1.S1_at

GA20-oxidase 3 (synthesis-degradation)

SGN-U321270

8.83

5.19

9.04

7.55

Les.65.1.S1_at

GA20-oxidase 2 (synthesis-degradation)

SGN-U333339

5.17

4.79

5.67

6.83

  1. Hormone genes that changed in parthenocarpic fruit set with respect to normal fruit set. RP75/59 Ant_E, UC82 Ant_E, RP75/59 3DPA_E and UC82 3DPA_E columns showed the mean values of expression for each gene according to the microarray, after normalization and log2 transformation.