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Table 4 Cell division and cycle genes

From: Transcriptomic analysis of tomato carpel development reveals alterations in ethylene and gibberellin synthesis during pat3/pat4 parthenocarpic fruit set

Array probe set

Gen description

Assigned SGN

RP75/59 Ant_E

UC82 Ant_E

RP75/59 3DPA_E

UC82 3DPA_E

Cell division related

Ā Ā Ā Ā Ā Ā 

Les.2949.1.S1_at

PCNA2 proliferating cell nuclear antigen 2 (PCNA2)

SGN-U318069

11.39

9.86

11.98

12.4

LesAffx.67274.1.S1_at

Aurora kinase b

Ā 

7.04

6.36

7.72

8.29

Cell cycle arrest

Ā Ā Ā Ā Ā Ā 

Les.450.1.S1_at

Cyclin-dependent kinase inhibitor 3

SGN-U322716

7.78

7.82

8.57

9.34

DNA replication licensing factor

Ā Ā Ā Ā Ā Ā 

Les.4978.1.S1_at

DNA replication licensing factor

SGN-U322656

10.42

9.29

10.89

11.18

Les.5283.1.S1_at

DNA replication licensing factor mcm5

Ā 

10.54

9.18

10.91

11.2

G2/M transition of mitotic cell cycle

Ā Ā Ā Ā Ā Ā 

Les.3713.1.S1_at

Cyclin-dependent kinase

Ā 

8.36

7.1

10.47

11.32

M phase of meiotic cell cycle

Ā Ā Ā Ā Ā Ā 

Les.89.1.S1_at

RAD51

SGN-U330095

7.44

6.77

8.37

8.98

M phase of mitotic cell cycle

Ā Ā Ā Ā Ā Ā 

LesAffx.25483.1.S1_at

Anaphase-promoting complex subunit 11 homolog

Ā 

9.63

8.93

9.75

10.12

LesAffx.60610.2.S1_at

Ubiquitin-conjugating enzyme E2C

Ā 

8.63

7.49

11.23

12.24

Regulation of progression through cell cycle

Ā Ā Ā Ā Ā Ā 

Les.107.1.S1_at

Cyclin a2

SGN-U326225

6.14

5.54

7.77

8.54

Les.351.1.S1_at

Cyclin-dependent kinase

SGN-U321700

8.17

6.98

10.19

11.09

Les.3519.1.S1_at

Cyclin d3-2

Ā 

10.23

8.99

11.81

12.19

Les.3520.1.S1_at

Cyclin d3-2

SGN-U321308

11.06

9.68

12.2

12.64

Les.5343.1.S1_at

Cell division control protein 6

SGN-U323296

7.18

5.95

7.94

8.38

LesAffx.19390.1.S1_at

CCNB2_MEDVAG2 mitotic-specific cyclin-2 (b-like cyclin)

Ā 

7.14

7.65

8.88

9.79

Replication protein a2

Ā Ā Ā Ā Ā Ā 

Les.5740.1.S1_at

Replication protein a2

SGN-U322617

10.2

8.76

10.85

11.18

  1. Cell cycle and cell division genes that changed in parthenocarpic fruit set with respect to normal fruit set. RP75/59 Ant_E, UC82 Ant_E, RP75/59 3DPA_E and UC82 3DPA_E columns showed the mean values of expression for each gene according to the microarray, after normalization and log2 transformation.