Table 3 GeneChip data integrated into TRUNCATULIX.
From: TRUNCATULIX – a data warehouse for the legume community
Experiment | Number of GeneChip arrays |
|---|---|
Mature organs series | 24 |
Leaf: 4-week old trifolia were harvest without their petioles (but with their petiolule) [46] | 3 |
Petiole: Petioles from 4-week old plant [46] | 3 |
Stem: Stems of 4-week old plants (without vegetative buds) [46] | 3 |
Vegetative Bud: Vegetative buds of 4-week old plants [46] | 3 |
Root: 4-week old non-inoculated roots [46] | 3 |
Nodule: Nodules from 4-week old plants [46] | 3 |
Flower: Fully open flowers were harvest at the day of anthesis [46] | 3 |
Pod: Mix of small, medium and physiologically mature pods [46] | 3 |
Nodulation development series | 12 |
Root-0d: Roots at 0 dpi (control for nodule developmental series) [46] | 3 |
Nod4d: Nodules at 4 dpi (root lumps with residual roots) [46] | 3 |
Nod10d: Developing nodules at 10 dpi [46] | 3 |
Nod14d: Mature nodules at 14 dpi [46] | 3 |
Seed development series | 18 |
Seed10d: Developing seeds at early embryogenesis – 10 dap [46] | 3 |
Seed12d: Developing seeds at 12 dap (transition between embryogenesis and seed filling) [46] | 3 |
Seed16d: Developing seeds at 16 dap (accumulation of storage proteins) [46] | 3 |
Seed20d: Developing seeds at 20 dap (seed filling) [46] | 3 |
Seed24d: Developing seeds at 24 dap (maturation phase) [46] | 3 |
Seed36d: Developing seeds at 36 dap (physiologically mature seeds, desiccation) [46] | 3 |
Total | 54 |