Table 1 List of representative ESTs differentially regulated in salicyl alcohol-fed cultures.
From: Glycosylation-mediated phenylpropanoid partitioning in Populus tremuloides cell cultures
EST ID | Putative function | JGI Gene Model | Ratio | Adjusted P-value |
|---|---|---|---|---|
Defense | ||||
MTU6CR.P6.H02 | Peroxidase | estExt_fgenesh4_pm.C_870009 | 8.18 | < 0.001 |
MTU6TR.P1.H11 | Glutathione S-transferase | grail3.0036009801 | 4.37 | < 0.001 |
MTU6TR.P12.E08 | Dehydrin | estExt_fgenesh4_pg.C_LG_V1612 | 3.13 | < 0.001 |
MTU6CR.P6.E04 | Osmotin-like protein | gw1.I.8918.1 | 2.77 | < 0.001 |
MTU6CR.P18.H10 | Pollen Ole e 1 allergen and extensin family protein | eugene3.00040501 | 2.62 | 0.006 |
MTU6CR.P17.A06 | Germin-like protein | estExt_fgenesh4_pm.C_LG_XIII0003 | 2.09 | 0.015 |
MTU6TR.P2.F05 | hypersensitive-induced reaction protein | estExt_fgenesh4_pg.C_LG_XVII0326 | 2.07 | 0.006 |
MTU6CR.P15.D05 | Germin-like protein | gw1.131.45.1 | 1.99 | 0.001 |
MTU6TR.P1.D06 | Polyphenol oxidase | eugene3.00110271 | 1.92 | 0.001 |
MTU6CR.P11.H04 | Cysteine protease inhibitor | gw1.IX.4482.1 | 1.88 | 0.002 |
MTU7CL.P2.B11 | Carbohydrate oxidase, antifungal | gw1.I.5965.1 | 1.81 | < 0.001 |
MTU5CS.P13.E03 | Harpin-induced protein | gw1.VI.811.1 | 1.71 | < 0.001 |
MTU4CA.P21.G12 | Thaumatin-like protein | gw1.I.9073.1 | 1.62 | 0.001 |
MTU6CR.P14.C11 | Glutathione reductase | estExt_Genewise1_v1.C_LG_III0933 | 1.58 | 0.002 |
MTU7TL.P6.C04 | Disease resistance protein | estExt_fgenesh4_pg.C_LG_II1171 | 1.55 | 0.001 |
MTU3TS.P13.B07 | Metallothionein | eugene3.00091335 | 1.50 | 0.020 |
MTU6CR.P16.G06 | Chitinase-like protein | estExt_fgenesh4_pm.C_LG_XIV0394 | 1.48 | 0.001 |
MTU2CA.P11.E09 | CuZn-superoxide dismutase | eugene3.00700152 | 1.47 | 0.028 |
MTU2TA.P7.F06 | CuZn-superoxide dismutase | estExt_Genewise1_v1.C_LG_XIII1233 | 1.36 | 0.046 |
MTU5CS.P17.E01 | Hypersensitive-induced response protein | eugene3.00170326 | 0.75 | 0.037 |
MTU4TA.P24.C04 | disease resistance protein | estExt_fgenesh4_pg.C_400229 | 0.72 | 0.037 |
MTU7CL.P4.C10 | Latex-like protein | estExt_Genewise1_v1.C_LG_X6115 | 0.64 | 0.028 |
Glycolysis and TCA cycle | ||||
MTU4TA.P27.C06 | Aconitase | estExt_fgenesh4_pg.C_LG_II2062 | 1.74 | 0.005 |
MTU6CR.P8.F06 | Enolase | eugene3.00151093 | 1.59 | 0.031 |
MTU5CS.P4.B07 | Glyceraldehyde 3-phosphate dehydrogenase | estExt_fgenesh4_pg.C_LG_X0484 | 1.52 | 0.023 |
MTU4CA.P22.C01 | Transaldolase | grail3.0047006401 | 1.44 | 0.015 |
MTU7TL.P15.C08 | Phosphoglycerate kinase | estExt_fgenesh4_pm.C_LG_VIII0335 | 1.36 | 0.025 |
MTU6TR.P1.A05 | Malate dehydrogenase | estExt_Genewise1_v1.C_LG_I4975 | 1.35 | 0.039 |
MTU2TA.P7.B04 | Phosphoglycerate mutase | estExt_fgenesh4_pg.C_LG_XVI1334 | 1.34 | 0.034 |
MTU2CA.P15.F06 | Isocitrate dehydrogenase | grail3.0038019202 | 1.30 | 0.023 |
Sugar metabolism | ||||
MTUNUL1.P10.C04 | Fructose-1,6-bisphosphatase | estExt_fgenesh4_pg.C_LG_VIII0539 | 1.45 | 0.007 |
MTU5CS.P7.G01 | Vacuolar invertase | estExt_fgenesh4_pg.C_LG_III0902 | 2.22 | 0.006 |
MTU5CS.P10.C09 | Sucrose synthase | estExt_fgenesh4_pg.C_280066 | 1.34 | 0.015 |
Phenylpropanoid metabolism | ||||
MTU6CR.P7.E07 | Phenylalanine ammonia-lyase | fgenesh4_pg.C_LG_X002043 | 0.67 | 0.042 |
MTUNUL1.P25.A01 | Cinnamoyl-CoA reductase | estExt_fgenesh4_kg.C_LG_III0056 | 0.60 | 0.002 |
MTU5CS.P10.C05 | S-adenosylmethionine synthase | grail3.0050014702 | 0.57 | < 0.001 |
MTU5CS.P3.F03 | S-adenosylmethionine synthase | estExt_fgenesh4_pm.C_LG_XIV0257 | 0.55 | 0.005 |
MTUNUL1.P46.F06 | Caffeoyl-CoA O-methyltransferase | grail3.0001059501 | 0.43 | 0.002 |
MTU2TA.P2.H05 | Phenylalanine ammonia-lyase | estExt_Genewise1_v1.C_280658 | 0.43 | 0.010 |