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Table 3 Pearson correlation coefficients comparing expression vectors of jasmonate related genes

From: An extensive (co-)expression analysis tool for the cytochrome P450 superfamily in Arabidopsis thaliana

P450 name Data set Correlation coefficient (r-value) of P450 with jasmonate related gene
   LOX2 LOX3 LOXL1 LOXL2 AOS HPL1 AOC1 AOC2 AOC4 OPR2 OPR3 OPRL1/2 TAT3 JR2
CYP74A organs 0.64 - - - 1.00 - 0.88 - - 0.56 0.69 - 0.60 0.70
AOS stress 0.67 0.58 - - 1.00 0.60 0.81 - - - 0.71 - - -
  hormones 0.57 0.81 - 0.79 1.00 0.59 0.80 0.80 - - 0.86 - 0.71 0.55
  mutants - 0.61 0.50 - 1.00 - 0.62 - - - - - - 0.51
CYP81D1 organs - - - - - - - - - - - 0.55 0.66 -
  stress 0.52 - - - 0.57 0.51 0.50 - - - 0.60 - 0.61 0.53
  hormones - 0.51 - - 0.52 - 0.63 - - - 0.61 - 0.54 -
CYP94C1 stress - 0.58 - - - - - 0.67 - - 0.61 - - -
  hormones - 0.79 - 0.79 0.69 - 0.58 0.63 - - 0.79 - 0.55 -
  mutants - 0.69 - 0.71 - - - 0.62 - - 0.61 - - -
CYP94B1 hormones - 0.64 - 0.61 0.61 0.53 0.51 - - - 0.64 - - -
  mutants - 0.62 - 0.51 0.63 - 0.51 - - - 0.60 - - -
CYP96A4 organs 0.60 0.56 - 0.50 0.64 0.52 0.61 - - - 0.61 - 0.65 0.57
  hormones - 0.64 - 0.60 0.74 0.71 0.60 - - - 0.72 - - -
CYP74B2 organs 0.73 - - - - 1.00 - - 0.52 - - - - 0.62
HPL1 stress 0.67 - - - 0.60 1.00 0.53 - - - 0.57 - - 0.54
CYP97B3 organs 0.71 - - - 0.58 0.59 0.63 - - - - 0.66 - 0.65
CYP90A1 organs 0.63 - - - 0.56 - 0.57 - 0.66 - - 0.51 - 0.56
CYP72A11 organs 0.74 - - - 0.69 - 0.78 - 0.53 - 0.56 0.65 0.52 0.67
CYP83B1 organs - - - - 0.76 - 0.69 - - 0.57 0.63 - 0.58 0.55
CYP71B7 organs - - - - 0.80 - 0.82 - - 0.61 0.52 - 0.52 0.56
CYP72A8 organs 0.59 - - - 0.56 - 0.62 - - 0.60 - 0.68 0.59 -
  1. Shown are genes in the pathways, which have at least one co-expressed P450; only P450s are shown, which have at least six co-expressed jasmonate genes (r > 0.5) in at least one data set. Abbreviations of genes (AGI locus and Affymetrix probe set are given in brackets): LOX2: lipoxygenase 2 (At3g45140, 252618_at); LOX3: lipoxygenase 3 (At1g17420; 261037_at); LOXL1: lipoxygenase like 1 (At1g67560; 260190_at); LOXL2: (At1g72520; 260399_at); AOS, CYP74A: allene oxide synthase (At5g42650; 249208_at); HPL1, CYP74B2: hydroperoxide lyase 1 (At4g15440; 245253_at); AOC1: allene oxide cyclase 1 (At3g25760; 257641_s_at); AOC2: allene oxide cyclase 2 (At3g25780; 257644_at); AOC4: allene oxide cyclase 4 (At1g13280; 259366_at); OPR2: 12-oxophytodienoic acid reductase 2 (At1g76690; 259875_s_at); OPR3: 2-oxophytodienoate reductase 3 (At2g06050; 265530_at); OPRL1/2: 12-oxophytodienoate reductase like 1 and 2 (At1g17990/At1g18020; 255895_at); TAT3: tyrosine aminotransferase 3 (At2g24850; 263539_at); JR2: cystine lyase, jasmonic acid response 2.