Trait
|
QTL position
|
LOD
|
LOD threshold
|
% var
|
KW sig
|
---|
|
LG
|
Map
|
Peak (cM)
|
Nearest marker
|
cM
|
Interval
| |
α = 0.20
|
α = 0.05
| | |
---|
FT
|
1
|
Ia
|
54.7
|
VVIS21
|
44.7
|
43.1–66.6
|
2.3, 3.2, 4.3
|
2.0
|
2.8
|
6.3, 11.7, 8.6
|
1, 1, 2
|
| |
Ib
|
88.2
|
mCTGeACC1
| |
83.0–88.9
|
2.1, 4.7, 3.1
|
2.0
|
2.8
|
6.3, 11.5, 6.5
|
0, 3, 3
|
|
1
|
Ca
|
54.4
|
VVIS21
|
44.4
|
44.3–65.0
|
2.3, 3.8, 4.6
|
2.2
|
3.2
|
7.8, 13.9, 9.1
|
1, 1, 2
|
| |
Cb
|
87.5
|
mCTGeACC1
| |
82.8-b
|
-, 4.8, 3.1
|
2.2
|
3.2
|
-, 11.7, 6.6
|
-, 3, 3
|
|
1
|
BPa
|
35.4
|
VVIS21
|
25.4
|
24.3–46.4
|
2.3, 3.1, 4.2
|
2.1
|
3.0
|
6.2, 11.4, 8.4
|
1, 1, 2
|
| |
BPb
|
67.3
|
mCTGeACC1
| |
62.2–68.0
|
2.1, 4.7, 3.1
|
2.1
|
3.0
|
6.3, 11.5, 6.6
|
0, 3, 3
|
|
2
|
I
|
35.0
|
VVIB23
| |
31.9–36.5
|
3.4, 3.5, 8.2
|
2.0
|
2.9
|
9.1, 7.3, 16.1
|
3, 4, 7
|
|
2
|
C
|
62.6
|
VVIB23
| |
59.5–64.0
|
3.3, 3.6, 8.4
|
2.2
|
2.9
|
9.0, 7.7, 16.4
|
3, 4, 7
|
|
2
|
BP
|
60.2
|
VVIB23
| |
55.1–61.5
|
3.4, 3.5, 8.1
|
2.0
|
2.9
|
9.2, 7.4, 16.1
|
3, 4, 7
|
|
6
|
I
|
5.0
|
VVIN31
|
t
|
t-9.5
|
4.1, 7.4, 6.8
|
1.8
|
2.6
|
13.8, 20.5, 15.5
|
3, 7, 5
|
|
6
|
C
|
5.0
|
VVIN31
|
t
|
t-9.5
|
3.9, 7.2, 6.8
|
1.9
|
2.7
|
13.4, 19.9, 15.4
|
3, 7, 5
|
|
6
|
BP
|
5.0
|
VVIN31
|
t
|
t-9.2
|
4.1, 7.4, 6.9
|
1.9
|
2.8
|
13.9, 20.8, 15.6
|
3, 7, 5
|
VT
|
2
|
I
|
30.1
|
VVIO55
| |
27.0–31.9
|
3.5, 3.0, 5.6
|
2.3
|
3.5
|
6.6, 5.9, 12.6
|
0, 3, 1
|
|
2
|
C
|
55.0
|
VMC2C10.1
| |
52.0–55.2
|
3.5, 2.9, 5.6
|
2.6
|
4.0
|
6.6, 5.8, 12.6
|
0, 1, 1
|
|
2
|
BP
|
52.5
|
VMC2C10.1
| |
48.1–53.4
|
3.5, 2.9, 5.6
|
2.0
|
2.7
|
6.6, 5.8, 12.6
|
0, 1, 1
|
|
6
|
I
|
17.6
|
VMC4G6
| |
13.4–18.0
|
4.6, 4.9, -
|
1.6
|
2.4
|
9.0, 9.8, -
|
3, 4, -
|
|
6
|
C
|
17.6
|
VMC4G6
| |
13.5–17.9
|
4.8, 4.9, -
|
1.8
|
2.6
|
9.3, 9.9, -
|
3, 4, -
|
|
6
|
BP
|
17.4
|
VMC4G6
| |
13.4–17.7
|
4.8, 4.9, -
|
1.9
|
2.7
|
9.3, 9.9, -
|
3, 4, -
|
|
16
|
I
|
17.8
|
VMC1E11
| |
15.6–20.6
|
13.7, 9.7, 11.3
|
1.8
|
2.5
|
31.6, 21.1, 29.1
|
7, 7, 7
|
|
16
|
C
|
16.9
|
VMC1E11
|
18.0
|
15.2–20.5
|
15.1, 9.6, 11.9
|
1.9
|
2.7
|
38.0, 24.1, 45.4
|
7, 7, 7
|
|
16
|
BP
|
17.8
|
VMC1E11
| |
14.3–17.8
|
14.0, 9.7, 11.5
|
1.5
|
2.2
|
32.1, 21.2, 29.1
|
7, 7, 7
|
VP
|
2
|
I
|
19.0
|
mCTGeACC2
| |
3.6–20.2
|
13.6, 15.4, 7.0
|
2.1
|
3.9
|
41.8, 38.0, 44.2
|
7, 7, 7
|
|
2
|
C
|
40.9
|
colour
| |
40.2–45.9
|
14.0, 16.4, -
|
3.0
|
4.4
|
40.0, 39.8, -
|
7, 7, -
|
|
2
|
BP
|
40.5
|
colour
| |
39.8–44.4
|
13.9, 16.4, 4.3
|
2.0
|
2.7
|
38.9, 39.6, 15.8
|
7, 7, 7
|
R
|
6
|
I
|
19.6
|
VMC4H5
| |
18.4–20.8
|
4.1, 3.5, -
|
1.7
|
2.5
|
17.2, 10.2, -
|
5, 2, -
|
|
6
|
C
|
19.7
|
VMC4H5
| |
18.5–21.0
|
4.1, 3.5, -
|
1.9
|
2.7
|
17.2, 10.2, -
|
5, 2, -
|
|
6
|
BP
|
19.6
|
VMC4H5
| |
18.3–20.8
|
4.1, 3.5, -
|
1.9
|
2.7
|
17.2, 10.2, -
|
5, 2, -
|
F-V
|
2
|
I
|
24.0
|
VMC5G7
|
24.2
|
20.4–24.8
|
7.7, 6.4, 5.7
|
2.5
|
3.9
|
18.7, 14.0, 12.6
|
6, 6, 4
|
|
2
|
C
|
51.2
|
VMC5G7
|
51.4
|
47.1–51.8
|
7.7, 6.4, 5.8
|
2.8
|
4.1
|
18.4, 13.8, 12.7
|
6, 6, 4
|
|
2
|
BP
|
45.5
|
VMC5G7
|
48.9
|
40.4–49.4
|
8.0, 6.5, 5.8
|
1.9
|
2.8
|
21.4, 15.6, 12.7
|
6, 6, 4
|
|
6
|
I
|
17.6
|
VMC4G6
| |
13.3–18.0
|
3.9, 4.0, -
|
1.7
|
2.5
|
8.5, 8.2, -
|
1, 1, -
|
|
6
|
C
|
17.6
|
VMC4G6
| |
13.3–18.0
|
3.9, 4.0, -
|
1.8
|
2.6
|
8.5, 8.2, -
|
1, 1, -
|
|
6
|
BP
|
17.4
|
VMC4G6
| |
13.3–17.8
|
3.9, 4.0, -
|
1.9
|
2.6
|
8.5, 8.2, -
|
1, 1, -
|
|
16
|
I
|
17.8
|
VMC1E11
| |
15.8–19.1
|
7.9, 7.3, 11.4
|
1.8
|
2.6
|
18.7, 15.5, 27.8
|
7, 7, 7
|
|
16
|
C
|
18.0
|
VMC1E11
| |
15.8–19.3
|
8.7, 7.2, 11.8
|
1.9
|
2.6
|
23.0, 15.4, 37.2
|
7, 7, 7
|
|
16
|
BP
|
17.8
|
VMC1E11
| |
15.0–17.8
|
7.9, 7.2, 11.4
|
1.4
|
2.2
|
18.7, 15.4, 27.8
|
7, 7, 7
|
F-R
|
6
|
I
|
19.6
|
VMC4H5
| |
18.3–21.0
|
3.6, 3.1, -
|
1.7
|
2.6
|
15.3, 9.1, -
|
4, 2, -
|
|
6
|
C
|
19.7
|
VMC4H5
| |
18.3–21.2
|
3.6, 3.1, -
|
1.8
|
2.5
|
15.3, 9.1, -
|
4, 2, -
|
|
6
|
BP
|
19.6
|
VMC4H5
| |
18.1–21.0
|
3.6, 3.1, -
|
1.9
|
2.6
|
15.3, 9.1, -
|
4, 2, -
|
V-R
|
2
|
I
|
35.0
|
VVIB23#
| |
29.9–35.7
|
3.3, 6.6, 6.0
|
2.0
|
3.0
|
15.4, 18.0, 20.7
|
2, 7, 7
|
|
2
|
C
|
62.6
|
VVIB23#
| |
57.3–63.3
|
3.4, 6.5, 5.9
|
2.2
|
3.1
|
14.6, 17.8, 19.9
|
2, 7, 7
|
|
2
|
BP
|
60.2
|
VVIB23#
| |
55.1–60.8
|
3.7, 6.6, 6.2
|
2.0
|
2.8
|
15.9, 18.1, 21.7
|
2, 7, 7
|
|
12*
|
I
|
18.7
|
VMC2H4
|
23.8
|
7.8–29.5
|
3.2, -, 2.6
|
2.0
|
2.8
|
16.7, -, 10.4
|
3, -, 1
|
|
12*
|
C
|
21.9
|
VMC2H4
| |
21.4–28.5
|
3.3, -, 2.8
|
1.9
|
2.7
|
13.5, -, 9.0
|
3, -, 3
|
|
12*
|
BP
|
18.8
|
PHEA-sscp
| |
16.3–19.2
|
3.5, -, 2.5
|
1.9
|
2.6
|
16.8, -, 9.1
|
0, -,0
|
MBW
|
1
|
C
|
18.9
|
mCACeATC4
| |
t-19.5
|
3.2, 2.6, 5.4
|
2.2
|
3.1
|
10.7, 4.7, 17.5
|
1, 2, 4
|
|
1
|
BP
|
t
|
mCACeATC4
| |
t-0.9
|
-, 2.4, 3.7
|
2.0
|
2.8
|
-, 4.6, 9.1
|
-, 2, 4
|
|
12
|
C
|
29.8
|
mCTGeAAG5
| |
22.8–29.8
|
3.4, 3.2, 3.9
|
1.9
|
2.8
|
8.4, 5.6, 8.8
|
2, 2, 6
|
|
12
|
BP
|
28.5
|
mCTGeAAG5
| |
20.6–28.6
|
2.4, 3.2, 3.7
|
1.9
|
2.8
|
5.1, 5.7, 8.0
|
1, 2, 6
|
|
18
|
C
|
81.9
|
SdI
| |
74.5–81.9
|
14.2, 19.4, 11.5
|
2.5
|
3.3
|
41.7, 43.1, 32.6
|
7, 7, 7
|
|
18
|
BP
|
17.4
|
SdI
| |
13.8–17.4
|
11.8, 18.3, 9.9
|
1.9
|
2.6
|
29.6, 40.8, 27.2
|
7, 7, 7
|
MSN
|
2
|
I
|
35.0
|
VVIB23
| |
31.6–35.6
|
6.2, 8.5, -
|
1.9
|
2.6
|
19.6, 22.9, -
|
7, 7, -
|
|
2
|
C
|
62.6
|
VVIB23
| |
60.8–63.0
|
6.3, 8.5, -
|
2.1
|
2.9
|
19.9, 22.9, -
|
7, 7, -
|
|
2
|
BP
|
60.2
|
VVIB23
| |
58.7–60.7
|
6.3, 8.5, -
|
2.0
|
2.7
|
19.8, 22.9, -
|
7, 7, -
|
% SDM
|
18
|
BP
|
17.4
|
SdI
| |
13.1–17.5
|
65.9, 61.7, 59.2
|
2.1
|
3.6
|
90.0, 86.5, 91.4
|
7, 7, 7
|
MSFW
|
6*
|
BP
|
42.3
|
mCACeACA4
| |
39.4–48.3
|
3.4, -, 4.2
|
1.9
|
2.7
|
5.3, -, 13.2
|
0, -, 4
|
|
6
|
C
|
47.2
|
mCTCeACA1
| |
37.4–48.3
|
4.3, 2.1, 5.8
|
1.8
|
2.5
|
11.3, 3.5, 21.4
|
1, 1, 4
|
|
10
|
I
|
43.3
|
mCTAeAAG10
| |
39.0–53.0
|
2.6, 3.3, -
|
2.0
|
2.7
|
9.4, 10.0, -
|
0, 0, -
|
|
10
|
C
|
47.2
|
mCTAeAAG10#
| |
46.9–55.6
|
4.4, 6.4, '-
|
2.3
|
3.0
|
36.3, 13.4, -
|
2, 0, -
|
|
10
|
BP
|
50.0
|
mCTGeATT18
|
50.6
|
44.8–55.7
|
2.9, 4.2, 2.2
|
2.0
|
2.7
|
7.7, 12.1, 9.8
|
2, 3, 0
|
|
13
|
I
|
62.6
|
mCATeATG9#
|
b
|
42.5–b
|
3.5, 3.9, -
|
1.9
|
2.7
|
14.6, 14.2, -
|
1, 3, -
|
|
13
|
C
|
b
|
mCATeATG9#
| |
52.0–b
|
3.8, 4.4, -
|
2.3
|
3.0
|
8.8, 15.7, -
|
0, 3, -
|
|
13
|
BP
|
25.5
|
VMC3D12#
| |
25.1–29.8
|
3.3, 3.4, -
|
1.7
|
2.4
|
7.2, 7.8, -
|
1, 2, -
|
|
15
|
I
|
5.8
|
mCACeACA10#
| |
5.5–13.5
|
2.1, 2.6, 3.5
|
1.9
|
2.6
|
7.5, 6.7, 13.0
|
0, 0, 5
|
|
18
|
C
|
80.1
|
SdI
|
81.9
|
65.0–82.0
|
10.7, 5.5, 6.4
|
2.4
|
3.2
|
27.5, 15.8, 25.7
|
7, 4, 6
|
|
18
|
BP
|
17.4
|
SdI
| |
8.7–17.7
|
10.3, 3.9, 5.9
|
1.9
|
2.7
|
26.3, 13.8, 24.8
|
7, 4, 6
|
MSDW
|
2*
|
I
|
35.0
|
VVIB23
| |
29.8–36.7
|
3.3, -, 2.9
|
1.8
|
2.6
|
10.5, -, 10.8
|
6, -, 2
|
|
2*
|
C
|
62.6
|
VVIB23
| |
60.4–63.2
|
8.9, -, 2.3
|
2.2
|
8.0
|
4.6, -, 3.7
|
6, -, 2
|
|
15
|
I
|
5.8
|
mCACaACA10#
| |
5.2–12.3
|
-, 2.9, 2.2
|
1.8
|
2.6
|
-, 10.8, 8.2
|
-, 0, 2
|
|
15
|
C
|
5.7
|
mCACeACA10#
| |
5.5–9.4
|
-, 2.2, 3.2
|
1.8
|
2.8
|
-, 3.1, 5.4
|
-, 0, 2
|
|
18
|
C
|
80.1
|
SdI
|
81.9
|
72.0–81.4
|
55.5, 27.5, 19.8
|
2.2
|
3.4
|
73.8, 57.1, 49.3
|
7, 7, 7
|
|
18
|
BP
|
15.0
|
SdI
|
17.4
|
12.9–17.4
|
54.5, 25.6, 19.0
|
2.0
|
2.8
|
75.0, 62.1, 49.4
|
7, 7, 7
|
- LG = linkage group; Map = map in which the QTL was identified (I for Italia, C for consensus, BP for Big Perlon); Peak = QTL position as estimated by the cM distance of the local LOD maximum from the top of the linkage group, with 't' for top and 'b' for bottom of linkage group; Nearest marker = marker nearest to the QTL position; Interval = 1-LOD confidence interval of QTL position in cM; # = LOD peak position and confidence interval were not exactly the same in different years; LOD = LOD value at QTL position; LOD threshold = chromosome wide LOD threshold for type I error rates of 20% and 5%; %var = proportion of the total phenotypic variance explained by the QTL; KW = Kruskal-Wallis significance level, given by the P value (1 = 0.1, 2 = 0.05, 3 = 0.01; 4 = 0.005; 5 = 0.001; 6 = 0.0005; 7 = 0.0001). Complete data are referred to 2003 (2002 in case of QTL lack in 2003, as indicated by an asterisk), yearly details (year 2002, 2003 and 2004 are respectively in first, second and third position) are given for LOD scores, percentage of explained variance and Kruskal-Wallis significance, which represent the most variable data