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Table 7 Fruit ripening genes which respond to ethylene

From: Global gene expression analysis of apple fruit development from the floral bud to ripe fruit

Apple Genbank acc. Putative Annotationa Apple Genbank acc. Putative Annotationa
Ripening sub-cluster R1
EB118159 Short chain dehydrogenase/reductase (SDR) EB140551 Hypothetical protein
CN860849 Ceramide kinase CN906574 Senescence associated protein
CN870499 Hypothetical protein EB122632 Thaumatin protein
EB127428 LEA family protein CN911315 DNA binding bromodomain protein
CN895403 Integral membrane family protein EB151414 Major latex protein (MLP)
Ripening sub-cluster R2 Ripening sub-cluster R3
EB106359 Hypothetical protein CN932083 Chloroplast 50S ribosomal protein L22
CN862135 Hypothetical protein CN860052 5-oxoprolinase
EB114937 β-glucosidase precursor CN860296 Hypothetical protein
CN862240 Transaldolase ToTAL2 CN862389 Stress-responsive protein
EB116078 (S)-acetone-cyanohydrin lyase CN864680 (S)-2-hydroxy-acid oxidase
EB118291 Mannitol dehydrogenase CN851072 Calcineurin B-like protein
CN849429 Hypothetical protein EB121320 Ribosomal protein
CN863631 Sugar transporter CN886293 Isoflavone reductase
EB117418 (1–4)-β-mannan endohydrolase EB135086 Carbonic anhydrase
CN864737 DNA polymerase III polC-type EB126988 C2H2-type zinc finger protein
EB115757 Flavonol synthase CN939170 Glycerol-3-phosphate dehydrogenase
EB121772 Hypothetical protein CN939718 Sad1/unc-84 protein
CN887217 Hypothetical protein CN890306 Transaldolase protein
CN890755 CBL-interacting protein kinase EB137446 Cytochrome P450
EB135512 F-box family protein CN894690 NADH dehydrogenase
CN893578 C-4 methyl sterol oxidase EB137890 S-adenosylmethionine synthetase
CN889902 Auxin/aluminum-responsive CN895673 2-oxoisovalerate dehydrogenase
CN895410 Hypothetical protein EB138408 Hypothetical protein
CN895502 Vacuolar sorting receptor EB140312 Ribose-5-phosphate isomerase A
EB138209 Xyloglucan endotransglycosylase EB142251 Pectinacetylesterase
EB138429 LEA family protein CN941807 DEAD box RNA helicase
CN940062 Harpin induced protein (HIN1) CN943134 Hypothetical protein
EB139752 Seed storage/lipid transfer protein EB129495 Stress-responsive protein
EB139896 Auxin-responsive protein CN943168 Tubulin
EB128540 Profilin EB129522 MYB transcription factor
CN943110 Syntaxin CN945056 Hypothetical protein
EE663937 Ethylene receptor (EIN4/ETR2) CN883038 Hypothetical protein
EB140933 6-phosphogluconolactonase EB150480 Haloacid dehalogenase hydrolase
EB141282 Lipoxygenase EE663647 Hypothetical protein
CN901620 Hypothetical protein EG631194 S-adenosyl-L-methionine:carboxyl methyltransferase protein
EB144781 Lipid transfer protein CN876100 SCARECROW gene regulator
EB148006 Fimbrin protein (FIM1) CN877052 Hypothetical protein
EG631181 Thaumatin protein CN878203 Copine I protein
EG631195 Transferase family protein CN902180 Amidase protein
EG631213 β-amylase CN902277 Hypothetical protein
EB157538 Hypothetical protein CN902592 Heavy-metal associated domain-containing protein
CN875931 tatD deoxyribonuclease family CN911536 Hypothetical protein
EG631252 UDP-glucoronosyl/UDP-glucosyl transferase EB154218 MADS-box protein
EE663809 Pyruvate kinase CN914798 Hypothetical protein
CN912930 Pentatricopeptide repeat protein CN914935 MATE efflux protein
CN913545 Hypothetical protein CN914950 2OG-Fe(II) oxygenase family protein
CN909301 Hypothetical protein CN917878 H(+)-transporting ATPase
CN917441 Dormancy/auxin associated EE663837 Hypothetical protein
EB152801 Xyloglucan endotransglycosylase CN916212 AAA-type ATPase family protein
CN915067 Sugar transporter family protein CN916137 Phytase
CN915323 Hypothetical protein EB153327 Isocitrate lyase
EE663891 Polygalacturonase CN915191 Alcohol dehydrogenase
EG631317 Cytochrome P450 EG631278 Cytochrome P450
  1. Apple genes for which expression changed in response to ethylene treatment of mature apple fruit from an ACC oxidase knockout plant [22] which also had significantly altered expression during fruit ripening in the fruit development array.
  2. a Annotation of the apple genes, based on BLAST comparison of genes with public databases.