From: Light has a specific role in modulating Arabidopsis gene expression at low temperature
Response elements and conditions under which the elements induce genes | DREB1 | ABRE2 | AHBP3 | GBOX4 | GTBOX5 | LREM6 | CCAF7 | HSF8 | CGCG9 | SALT10 | DOFF11 |
---|---|---|---|---|---|---|---|---|---|---|---|
 | Cold | ABA | ABA | ABA/Light | Light | Light | Circadian | Heat | Calcium | Salt | Carbon |
Target genes, AGI Code, description | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
At1g56600, Galactinol synthetase.C/L | 2 | 7 | 4 | 7 | 6 | 2 | 2 | 0 | 1 | 0 | 1 |
At1g09350, Galactinol synthase. C/L, C/D | 1 | 3 | 1 | 5 | 2 | 1 | 0 | 0 | 0 | 0 | 1 |
At3g50970, XERO2, C/L, C/D | 3 | 0 | 5 | 0 | 1 | 3 | 0 | 0 | 0 | 0 | 4 |
At5g52310, RD29A, C/L, C/D | 4 | 1 | 2 | 3 | 4 | 0 | 0 | 0 | 2 | 1 | 3 |
At1g20450, ERD10, C/L, C/D | 3 | 2 | 3 | 0 | 3 | 2 | 0 | 1 | 1 | 1 | 3 |
At5g15960, KIN1, C/L | 1 | 4 | 0 | 4 | 5 | 2 | 0 | 1 | 0 | 0 | 1 |
At5g66400, RAB18, C/L | 1 | 3 | 4 | 2 | 5 | 0 | 0 | 0 | 2 | 1 | 2 |
At1g20340, PC, C/L | 1 | 2 | 1 | 5 | 5 | 4 | 0 | 1 | 2 | 3 | 4 |
At4g11600, GPX, C/L | 1 | 3 | 1 | 8 | 6 | 2 | 1 | 0 | 0 | 1 | 1 |
At1g77120, ADH, C/L | 0 | 3 | 2 | 3 | 6 | 1 | 1 | 1 | 0 | 0 | 4 |
At3g08940, LHCB4.2, C/L | 0 | 2 | 2 | 3 | 2 | 3 | 0 | 0 | 0 | 1 | 1 |
At3g27690, LHCB2.4, C/L | 0 | 1 | 6 | 6 | 1 | 2 | 3 | 1 | 0 | 0 | 1 |
At2g05070, LHCB2.2, C/L | 0 | 2 | 3 | 3 | 2 | 1 | 1 | 0 | 0 | 1 | 2 |
At1g29930, LCHB1.3, C/L | 0 | 3 | 1 | 5 | 3 | 7 | 4 | 0 | 0 | 0 | 1 |
At5g67030, ZEP, C/L | 0 | 3 | 1 | 6 | 3 | 0 | 4 | 0 | 0 | 0 | 1 |
At5g13930, Chalcone synthase. C/L | 0 | 4 | 1 | 3 | 1 | 3 | 0 | 1 | 0 | 0 | 2 |
Transcription factor genes | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
At4g25490, DREB1B, C/L, C/D | 0 | 3 | 2 | 5 | 5 | 1 | 0 | 0 | 0 | 0 | 2 |
At5g05410, DREB2A, C/L, C/D | 0 | 1 | 3 | 2 | 3 | 5 | 1 | 2 | 0 | 0 | 1 |
At2g46830, CCA1, C/L, C/D | 0 | 3 | 3 | 2 | 4 | 1 | 0 | 1 | 2 | 0 | 3 |
At1g49720, ABF1, C/L, C/D | 0 | 0 | 0 | 0 | 2 | 2 | 1 | 2 | 0 | 0 | 5 |
At1g13260, RAV113, C/D, C/L | 0 | 1 | 3 | 0 | 7 | 1 | 0 | 2 | 0 | 0 | 2 |
At1g51700, ADOF1, C/L | 0 | 0 | 0 | 0 | 9 | 1 | 3 | 1 | 0 | 1 | 2 |
At4g34590, ATB2-GBF6, C/L | 0 | 0 | 11 | 0 | 6 | 2 | 5 | 0 | 0 | 0 | 4 |
At5g63790, ANAC10212, C/L | 0 | 6 | 1 | 10 | 1 | 0 | 0 | 0 | 0 | 0 | 2 |
At5g08790, ATAF212, C/L | 1 | 1 | 3 | 6 | 3 | 2 | 1 | 0 | 0 | 0 | 3 |
At2g42280, MYC 14 D | 0 | 2 | 2 | 0 | 5 | 3 | 1 | 0 | 0 | 0 | 2 |
Miscellaneous, Dark induced genes | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
At3g12580, HSP70, C/D | 1 | 0 | 3 | 0 | 6 | 1 | 2 | 5 | 1 | 0 | 2 |
At2g32950, COP1 regulatory protein, D | 1 | 0 | 3 | 3 | 5 | 0 | 0 | 1 | 2 | 0 | 1 |
At4g02440, F-box protein, ZGT, D | 0 | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 2 | 0 | 2 |
Control set of random genes, no changed expression in C/L, C/D or D condition * | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
At2g37460, Root nodulin MtN21 | 0 | 0 | 0 | 0 | 4 | 0 | 1 | 0 | 0 | 0 | 0 |
At4g12550, Seed lipid transfer protein LTP | 0 | 0 | 3 | 0 | 6 | 0 | 1 | 1 | 0 | 0 | 0 |
At3g56020, 60S ribosomal protein L41 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 3 | 0 | 1 |
At4g31700, 40S ribosomal protein RPS6 | 0 | 0 | 5 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 |
At3g47600, MYB94 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 1 |
At1g73460, protein kinase | 0 | 0 | 0 | 0 | 1 | 0 | 2 | 1 | 2 | 0 | 1 |