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Table 5 Differentially regulated proteins in xylem sap of oilseed rape (Brassica napus var. napus) after infection with Verticillium longisporum VL43.

From: Defence reactions in the apoplastic proteome of oilseed rape (Brassica napus var. napus) attenuate Verticillium longisporumgrowth but not disease symptoms

Spot No

Similarity (Organism)

Peptide

NCBI (ACC)

Protein score (Threshold)

MW

Target peptide

XVL 1

basic glucanase (Bj)

IASSQAEADTWVR

LYDPNQEVLSALR

YISVGNEVQPSDPTSR

GISGFPPSSGTFTPEFR

NLFHALVDTVYAALEK

GSNIDLLLDVPNPDLQR

LDYALFTSPSTVVNDGSNAYR

gi|118763538

(ABC94638)

510 (44)

30722

S (RC 1)

 

β-1,3-glucanase (Ath)

LASSQAEADTWVR

GISGFPPSSGTFTPEFR

TYVNNLIQTVK

GSNIELVLDVPNPDLQR

gi|6735303(

At3g57240)

222 (45)

37632

S (RC 1)

XVL 2

not identified

    

XVL 3

PR4-Typ protein (Br)

VTNTGTQAQATVR

QIDTDGQGYAR

ATYHFYNPAQNGWDLYR

gi|73671284

(AF528181)

162 (44)

15950

S (RC 2)

  1. Spot numbers refer to Fig. 6. NCBI and accession number of the proteins identified by comparing the peptide sequence with NCBI databank are indicated. Protein score, predicted molecular weight (MW) and predicted target peptide with reliability class (RC) are indicated. Ath = Arabidopsis thaliana, Bj = Brassica juncea, Br = Brassica rapa