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Table 3 Primers used for quantitative PCR

From: Natural variation in CBF gene sequence, gene expression and freezing tolerance in the Versailles core collection of Arabidopsis thaliana

Primer name

Sequence

Source

CBF1 342U20

GTC AAC ATG CGC CAA GGA TA

this study

CBF1 513L20

TCG GCA TCC CAA ACA TTG TC

 

CBF2 341U20

GAA TCC CGG AAT CAA CCT GT

this study

CBF2 514L20

CCC AAC ATC GCC TCT TCA TC

 

CBF3 353U18

CAA CTT GCG CTA AGG ACA

this study

CBF3 515L18

TCT CAA ACA TCG CCT CAT

 

COR6.6-F

GAG ACC AAC AAG AAT GCC TTC C

Rohde et al., (2004).

COR6.6-R

TGC TCT TCT CCT CAG CTT TGC

 

COR15a-F

AAC GAG GCC ACA AAG AAA GC

Rohde et al., (2004).

COR15a-R

CAG CTT CTT TAC CCA ATG TAT CTG C

 

COR15b-F

CAA CGA AGC CAC AAA GAA AGC

Rohde et al., (2004).

COR15b-R

CCA TCC GCC AAG GCC TCC

 

COR47-F

ACA AGC CTA GTG TCA TCG AAA AGC

Rohde et al., (2004).

COR47-R

TCT TCA TCG CTC GAA GAG GAA G

 

COR78-F

GCA CCA GGC GTA ACA GGT AAA C

Rohde et al., (2004).

COR78-R

AAA CAC CTT TGT CCC TGG TGG

 

GAPDH3ÕF

TTGGTGACAACAGGTCAAGCA

Czeckowski et al., 2005

GAPDH3ÕR

AAACTTGT CGCTCAATGCAATC