A set of multiplex panels of microsatellite markers for rapid molecular characterization of rice accessions

BMC Plant Biology

Table 4 Fluorescently-labeled microsatellite markers which compose the three multiplex panels (Panel A, Panel B and Panel C)

Panel	Loci	Fluorescent Dye	Color	Expected Size range	Chrom.	Motif	Reference
A	RM252	TET	Green	194–274	4q	(ag)n	[53]
A	RM224	TET	Green	124–162	11q	(aag) ₈ (ag) ₁₃ g(ag)	[53]
A	OG44	6-FAM	Blue	152–172	3q	(ct) ₄ -23pb-(ct) ₂₂ (gt) ₄ (gc) ₆	[8]
A	RM248	6-FAM	Blue	72–108	7q	(ag)n	[53]
A	OS19	HEX	Yellow	174–198	6p	(ag)n	[54]
B	OG101	TET	Green	95–161	2p	(ag)n	[8]
B	OG106	TET	Green	178–254	9p	(ag)n	[8]
B	OG81	6-FAM	Blue	71–89	1	(ag)n	[8]
B	RM263	6-FAM	Blue	147–195	2q	(ag)n	[53]
B	OG05	HEX	Yellow	170–194	3p	(ag)n	[8]
B	OG61	HEX	Yellow	96–154	5q	(ag)n	[8]
C	RM335	6-FAM	Blue	104–156	4p	(ctt) ₂₅	[55]
C	RM420	6-FAM	Blue	183–201	7q	(aaat) ₇	[7]
C	RM418	6-FAM	Blue	253–311	7q	(att) ₂₁	[7]
C	RM259	NED	Yellow	155–176	1p	(ct) ₁₇	[53]
C	RM475	NED	Yellow	186–246	2q	(tatc) ₈	[7]

ISSN: 1471-2229