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Table 3 List of genes present in the plastid genomes of Nandina and Platanus

From: Rapid and accurate pyrosequencing of angiosperm plastid genomes

Gene Class     
Ribosomal RNAs rrn4.5 (×2) rrn5 (×2) rrn16 (×2) rrn23 (×2)
Transfer RNAs trnH-GUG trnK-UUU* trnQ-UUG trnS-GCU
  trnG-UCC* trnR-UCU trnC-GCA trnD-GUC
  trnY-GUA trnE-UUC trnT-GGU trnS-UGA
  trnG-GCC trnfM-CAU trnS-GGA trnT-UGU
  trnL-UAA* trnF-GAA trnV-UAC* trnM-CAU
  trnW-CCA trnP-UGG trnI-CAU (×2) trnL-CAA (×2)
  trnV-GAC (×2) trnI-GAU* (×2) trnA-UGC* (×2) trnR-ACG (×2)
  trnN-GUU (×2) trnL-UAG   
Photosystem I psaA psaB psaC psaI
  psaJ    
Photosystem II psbA psbB psbC psbD
  psbE psbF psbH psbI
  psbJ psbK psbL psbM
  psbN psbT psbZ  
Cytochrome b6/f petA petB* petD* petG
  petL petN   
ATP synthase atpA atpB atpE atpF*
  atpH atpI   
NADH ndhA* ndhB* (×2) ndhC ndhD
   dehydrogenase ndhE ndhF ndhG ndhH
  ndhI ndhJ ndhK  
Ribosomal proteins     
   large subunit rpl2* (×2) rpl14 rpl16* rpl20
  rpl22 rpl23 (× 2) rpl32 rpl33
  rpl36    
   small subunit rps2 rps3 rps4 rps7 (×2)
  rps8 rps11 rps12* (×2) rps14
  rps15 rps16* rps18 rps19
RNA polymerase rpoA rpoB rpoC1* rpoC2
Miscellaneous accD ccsA cemA clpP*
   proteins infA matK rbcL  
Hypothetical ycf1 ycf2 (×2) ycf3* ycf4
   proteins ycf15 (×2; present in Nandina; Ψ in Platanus)  
  1. List of genes present in the plastid genomes of Nandina and Platanus. Genes with an asterisk (*) contain introns; genes that are present as duplicate copies due to their position within the inverted repeat regions are indicated as (×2). Ψ = pseudogene.