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Table 4 Transcription factors

From: The American cranberry: first insights into the whole genome of a species adapted to bog habitat

TF_family Cranberry Apple Arabidopsis Grape Rice
MYB 119 428 263 275 252
bHLH 79 244 172 116 196
AP2-EREBP 74 274 166 145 188
C3H 70 148 83 54 109
C2H2 68 313 107 129 124
Orphans 53 136 86 140 216
PHD 52 127 55 70 61
HB 51 169 105 75 137
NAC 41 261 120 81 146
bZIP 37 107 110 50 127
SNF2 33 64 43 35 48
WRKY 32 145 85 64 119
GNAT 29 n.d. 41 32 45
SET 29 68 46 45 34
mTERF 26 n.d. 36 21 29
CCAAT 25 193 72 87 69
GRAS 25 121 36 51 63
Trihelix 23 27 27 62 26
TRAF 22 n.d. 29 19 90
ABI3VP1 21 80 59 36 60
G2-like 20 19 53 35 57
C2C2-Dof 19 58 44 24 36
FAR1 19 n.d. 24 42 129
LOB 19 n.d. 49 45 43
FHA 17 34 19 13 22
MADS 17 152 124 65 87
C2C2-GATA 16 39 37 24 37
AUX/IAA 15 52 35 24 52
TCP 15 58 30 18 25
SBP 14 42 28 19 29
ARF 12 37 35 19 49
HSF 12 56 24 20 40
OFP 12 n.d. 18 11 30
BSD 10 n.d. 12 7 8
HMG 9 23 21 12 20
RWP-RK 9 14 16 7 14
Jumonji 8 29 20 19 17
SWI/SNF-BAF60b 8 n.d. 17 14 10
Transcription Factors
ARID 7 n.d. 11 10 6
ARR-B 7 16 17 29 12
C2C2-CO-like 7 17 21 6 24
Sigma70-like 7 n.d. 6 6 7
Tify 7 n.d. 26 11 16
BES1 6 24 14 9 6
E2F-DP 6 15 14 7 12
TAZ 6 n.d. 8 3 2
TUB 6 21 15 11 26
CAMTA 5 n.d. 9 4 7
GeBP 5 13 20 3 6
SWI/SNF-SWI3 5 n.d. 5 5 4
zf-HD 5 29 18 17 15
BBR/BPC 4 6 16 3 9
DDT 4 n.d. 5 6 6
GRF 4 n.d. 9 7 13
HRT 4 n.d. 2 1 1
LUG 4 n.d. 7 3 7
Pseudo 4 n.d. 5 5 4
CSD 3 n.d. 4 3 4
Alfin-like 2 n.d. 9 6 9
Coactivator 2 n.d. 7 2 2
CPP 2 n.d. 9 6 11
DBP 2 n.d. 5 4 6
LIM 2 n.d. 10 5 6
PBF-2-like 2 n.d. 4 2 2
PLATZ 2 n.d. 14 9 15
SRS 2 8 13 6 6
C2C2-YABBY 1 n.d. 8 7 7
EIL 1 n.d. 6 4 8
IWS1 1 n.d. 2 1 1
LFY 1 n.d. 1 1 2
MBF1 1 n.d. 3 3 4
MED6 1 n.d. 1 1 1
RB 1 n.d. 1 2 2
Rcd1-like 1 n.d. 3 2 6
SAP 1 n.d. 1 1 0
SOH1 1 n.d. 1 0 2
TIG 1 n.d. 0 0 0
ULT 1 n.d. 2 1 2
VOZ 1 n.d. 3 2 2
ZIM 0 0 23 0 23
  1. The numbers found in cranberry for each family as compared to other selected species.