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Table 3 Top 10 nsSNPs having large impacts on gene functions

From: Sequencing of transcriptomes from two Miscanthus species reveals functional specificity in rhizomes, and clarifies evolutionary relationships

Gene

Position

Ref AA

Mut AA

Function

Sb10g004070

691

W

H

Pleiotropic drug resistance proteins, ABC superfamily

Sb01g043620

323

V

I

Calcium transporting ATPase

Sb01g019720

694

E

Q

C1-like domain|Cellulose synthase

Sb01g006310

193

V

I

Beta tubulin

Sb04g008580

231

G

S

Glycogen synthase kinase-3

Sb10g004070

688

Q

S

Pleiotropic drug resistance proteins, ABC superfamily

Sb03g027480

801

M

I

Pleiotropic drug resistance proteins, ABC superfamily

Sb03g027490

849

M

I

Pleiotropic drug resistance proteins, ABC superfamily

Sb04g008580

252

A

E

Glycogen synthase kinase-3

Sb10g004070

692

I

G

Pleiotropic drug resistance proteins, ABC superfamily

  1. Reference (Ref AA) and mutation amino acid (Mut AA) indicate sorghum allele and mutated allele in Miscanthus, respectively.