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Table 1 Summary of sequencing samples and results

From: Methylome reorganization during in vitro dedifferentiation and regeneration of Populus trichocarpa

Tissue Biological Illumina GAll Total reads Mapped reads  
  Replicates Lanes sequenced   No %
Internode explant 3 6 204, 768, 821 84,814, 829 41.4
Callus 3 6 214, 470, 025 48, 813, 758 22,8
Regenerated internode 3 3 147, 824, 747 35, 116, 532 23.8
Input 4 4 61, 453, 962
Totals 13 19 628, 517, 555 168,745, 119  
  1. Sequencing was performed on an Illumina GAIIx platform. Mapped reads include all non-clonal reads that aligned to unique loci on the reference genome, allowing up to two mismatches.