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Table 3 Outlier analysis for divergent selection between fiber and linseed types

From: Genetic characterization of a core collection of flax (Linum usitatissimum L.) suitable for association mapping studies and evidence of divergent selection between fiber and linseed types

  

Outlier analysis

   

Highest LD1

  

Locus

Linkage group

Ewens-Watterson

Ln RH

LOSITAN

Hierarchical

Fiber

Oil

FST

c206-s208_Lu128

2

n.s.

n.s.

***

**

0.03 (6.2)

0.03 (6.2)

0.43

c475-s917_Lu2021a

2

*

**

***

n.s.

0.01 (1.5)

0.03 (8.3)

0.04

c16-s156_Lu373

3

**

*

n.s.

n.s.

0.10 (1.9)

0.22 (1.9)

0.16

c36-s291_Lu176

5

**

n.s.

n.s.

*

0.02 (3.3)

0.06 (3.3)

0.27

c108-s305_Lu595

8

**

**

***

n.s.

0.00 (0.0)

0.00 (0.0)

0.10

c441-s225_Lu3189

8

*

n.s.

n.s.

*

0.05 (2.7)

0.31 (2.7)

0.32

c175-s86_Lu2824

9

*

**

***

n.s.

0.01 (4.1)

0.02 (6.9)

0.02

c306-s98_Lu765Bb

12

**

**

***

n.s.

0.09 (1.3)

1.00 (1.3)

0.07

c226-s280_Lu637

15

**

*

***

n.s.

0.02 (3.7)

0.13 (3.7)

0.01

  1. * P < 0.05, ** P < 0.01, *** false discovery rate (FDR) < 0.05, n.s. not statistically significant.
  2. 1 Highest LD between the candidate locus and one of the two adjacent loci. The genetic distance (cM) at which the highest LD extent was observed is indicated in brackets.
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BMC Plant Biology

ISSN: 1471-2229

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