Table 2 Mature sequence and precursor sequence conservation of novel miRNA
From: Genome-wide characterization of microRNA in foxtail millet (Setaria italica)
miRNA precursor | miRNA sequence | Conserved precursor | Conserved miRNA family |
|---|---|---|---|
nov-sit-MIR105 | GCTCACTCCTCTTTCTGTCAGC | sbi-MIR156a/e | miR156 |
nov-sit-MIR103 | GCTCACTTCTCTGTCTGTCAGC | sbi-MIR156f | miR156 |
nov-sit-MIR16 | TTGACAGAAGAGAGCGAGCAC | sbi-MIR156a | miR156 |
nov-sit-MIR117 | CGTGCTCACTACTCTTTCTGTC | sbi-MIR156g | miR156 |
nov-sit-MIR60 | TCGGACCAGGCTTCATTCCCCA | sbi-MIR166b | miR166 |
nov-sit-MIR05 | TTTCGGACCAGGCTTCATTCC | sbi-MIR166c | miR166 |
nov-sit-MIR58-2 | TCGGACCAGGCTTCATTCCCCT | sbi-MIR166a/j | miR166 |
nov-sit-MIR58-3 | TCGGACCAGGCTTCATTCCCCT | sbi-MIR166j | miR166 |
nov-sit-MIR77-2 | TAGCCAAGAATGACTTGCCT | sbi-MIR169i | miR169 |
nov-sit-MIR32 | TTAGCCAAGAATGGCTTGCCTA | sbi-MIR169q | miR169 |
nov-sit-MIR14 | TTGAGCCGCGTCAATATCTCC | sbi-MIR171h | miR171 |
nov-sit-MIR49 | TGAGCCGAGCCAATATCACT | sbi-MIR171c | miR171 |
nov-sit-MIR50 | TGAGCCGAACCAATATCACTC | sbi-MIR171e/f | miR171 |
nov-sit-MIR148 | AGTGGATGGCGCGGGAGCTAA | sbi-MIR319b | miR319 |
nov-sit-MIR114 | CTGAAGTGTTTGGGGAACTC | sbi-MIR395a | miR395 |
nov-sit-MIR123 | CGCCAAAGGAGAATTGCCCTG | sbi-MIR399b/h | miR399 |
nov-sit-MIR101 | GGCAGCTCTCCTCTGGCAGG | sbi-MIR399d | miR399 |
nov-sit-MIR89 | GTGCGGTTCTCCTCTGGCATG | sbi-MIR399h | miR399 |