Table 3 Underrepresented ESTs after array-CGH of haploid genomic DNA
From: Cytological and molecular characterization of three gametoclones of Citrus clementina
EST | Accession | Genotype ITA | Genotype FRA | Genotype ESP | Description | |||
|---|---|---|---|---|---|---|---|---|
Normalized ratio (*) | P-value (**) | Normalized ratio (*) | P-value (**) | Normalized ratio (*) | P-value (**) | |||
IC0AAA36DF07 | DY274520 | 2.08(0.98–3.45) | -- | 0.04(0.03–0.06) | 1.8E-04 | 0.04(0.01–0.09) | 5.0E-02 | No annotation available |
IC0AAA34BC06 | DY273568 | 0.34(0.26–0.63) | 1.4E-02 | 0.24(0.17–0.31) | 1.5E-03 | 0.31(0.28–0.40) | 1.0E-02 | No annotation available |
C34004E09 | FC930172 | 0.95(0.87–1.05) | -- | 0.13(0.09–0.20) | 1.7E-03 | 0.98(0.92–1.05) | -- | Cu/Zn-superoxide dismutase copper chaperone |
KN0AAA2CB01 | DY256847 | 1.00(0.64–1.92) | -- | 0.07(0.01–0.35) | 3.4E-02 | 0.78(0.39–2.19) | -- | Cu/Zn-superoxide dismutase copper chaperone |
C31204A07 | FC874254 | 1.04(0.85–1.20) | -- | 0.21(0.10–0.40) | 1.2E-02 | 2.33(1.78–3.87) | -- | Thaumatin-like protein isoform 3 |
IC0AAA74CE10 | DY290159 | 0.22(0.18–0.30) | 1.3E-03 | 1.65(1.30–2.07) | 1.4E-02 | 0.21(0.18–0.27) | 6.3E-03 | Nematode resistance-like protein |
KN0AAK2BA02 | DY259689 | 0.14(0.07–0.19) | 3.6E-03 | 1.74(1.24–2.59) | 3.9E-02 | 0.21(0.14–0.26) | 1.4E-02 | No annotation available |
C06013D07 | CX298593 | 0.23(0.11–0.40) | 1.1E-02 | 1.26(1.11–1.42) | 3.5E-02 | 1.37(1.29–1.45) | 1.1E-02 | No annotation available |
C31810G10 | FC924855 | 0.18(0.10–0.50) | 1.7E-02 | 1.81(1.35–2.64) | 3.8E-02 | 1.35(0.89–2.68) | -- | Copine I-like protein |
C08012E04 | CX301690 | 0.28(0.17–0.54) | 1.8E-02 | 1.87(1.40–2.58) | 2.3E-02 | 1.28(0.83–2.99) | -- | No annotation available |
IC0AAA56DH07 | DY282523 | 0.30(0.12–0.63) | 4.0E-02 | 1.66(1.43–2.13) | 1.2E-02 | 1.72(1.17–2.13) | -- | No annotation available |
IC0AAA89CG08 | DY295961 | 0.27(0.14–0.45) | 1.6E-02 | 0.43(0.28–0.99) | -- | 1.52(0.87–2.42) | -- | No annotation available |
KN0AAB2CE09 | DY258014 | 0.07(0.03–0.14) | 7.0E-03 | 1.59(1.16–2.14) | 4.0E-02 | 0.21(0.11–0.66) | -- | SJCHGC09076 protein |