Table 2 List of putative regulatory elements present in promoters of nine genes.
From: Differential effects of environment on potato phenylpropanoid and carotenoid expression
Motif | Sequence | Function | PAL | C4H | HCT | C3H | HQT | CHS | F3H | DFR | ANS |
|---|---|---|---|---|---|---|---|---|---|---|---|
Box 4 | ATTAAT | light responsiveness | 3 | 4 | 2 | 1 | 2 | 1 | 4 | 1 | 2 |
Box I | TTTCAAA | light responsive element | 1 | 3 | 2 | 2 | 1 | 1 | 3 | 2 | 2 |
CGTCA-motif | CGTCA | MeJA-responsiveness | 2 | 0 | 1 | 0 | 0 | 2 | 0 | 3 | 0 |
EIRE | TTCGACC | elicitor-responsive element | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
ERE | ATTTCAAA | ethylene-responsive element | 1 | 2 | 2 | 1 | 0 | 0 | 1 | 0 | 0 |
G-Box | CACGTN | light responsiveness | 2 | 0 | 4 | 0 | 1 | 5 | 2 | 8 | 1 |
GA-motif | AAGGAAGA | part of a light responsive element | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 1 |
GATA-motif | GATAGGA | part of a light responsive element | 0 | 2 | 0 | 0 | 0 | 1 | 3 | 1 | 0 |
GT1-motif | GGTTAA | light responsive element | 1 | 2 | 2 | 1 | 2 | 1 | 1 | 2 | 2 |
HSE | AAAAAATTTC | heat stress responsiveness | 1 | 2 | 2 | 1 | 0 | 0 | 1 | 3 | 3 |
I-box | AGATAAGG | part of a light responsive element | 1 | 2 | 0 | 0 | 1 | 0 | 3 | 2 | 2 |
L-box | TCTCACCAACC | part of a light responsive element | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 0 |
LTR | CCGAAA | low-temperature responsiveness | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
TC-rich repeats | RTTTTCTTMM | defense & stress responsiveness | 5 | 1 | 5 | 2 | 3 | 0 | 4 | 3 | 1 |
TCT-motif | TCTTAC | part of a light responsive element | 1 | 2 | 3 | 1 | 0 | 1 | 0 | 0 | 0 |
Circadian | CAANNNNATC | circadian control | 1 | 2 | 1 | 3 | 0 | 1 | 0 | 0 | 3 |