From: A diploid wheat TILLING resource for wheat functional genomics
Primer set (F+R) | Plant ID (Pool-Plate-rowcolumn) | Base pair change | Homo/heterozygous | Type of mutation | Amino acid change | Position of amino acid* | SIFT score | PSSM score |
---|---|---|---|---|---|---|---|---|
COMT1_A | 1-4-G6 | C>T | Hetero | Mis-sense | Thr>Met | 90 | 0.14 | 0 |
 | 2-1-E6 | G>A | Hetero | Silent | - | 91 | - | - |
 | 4-1-A3 | G>A | Homo | Mis-sense | Ala>Lys | 95 | 0.36 | +1 |
 | 4-1-A11 | G>A | Hetero | Mis-sense | Glu>Lys | 92 | 0.24 | +1 |
 | 5-7-D6 | G>A | Hetero | Mis-sense | Ala>Thr | 65 | 0.25 | +4 |
 | 6-10-G8 | G>A | Homo | Mis-sense | Glu>Lys | 116 | 0.23 | +1 |
COMT1_B | 1-2-B8 | C>T | Hetero | Mis-sense | Ala>Val | 275 | 0.45 | +4 |
 | 3-3-E4 | G>A | Hetero | Silent | - | 298 | - | - |
 | 4-3-B10 | G>A | Hetero | Mis-sense | Met>Ile | 261 | 0.55 | 0 |
 | 4-4-H5 | G>A | Homo | Mis-sense | Glu>Lys | 271 | 0.41 | −1 |
 | 5-8-A1 | G>A | Hetero | Mis-sense | Glu>Met | 298 | 0.16 | −4 |
 | 6-10-F3 | C>T | Hetero | Mis-sense | Pro>Ser | 248 | 0.42 | +2 |
HCT2_A | 1-3-B12 | G>A | Hetero | Mis-sense | Gly>Arg | 131 | 0.25 | −2 |
 | 2-5-G6 | G>A | Hetero | Silent | - | 100 | - | - |
 | 5-8-C3 | C>T | Homo | Silent | - | 72 | - | - |
 | 5-6-C11 | G>A | Hetero | Silent | - | 85 | - | - |
HCT2_B | 1-1-A4 | G>A | Hetero | Mis-sense | Glu>Lys | 208 | 0.45 | +1 |
 | 1-2-E7 | G>A | Homo | Silent | - | 371 | - | - |
 | 2-1-E12 | C>T | Hetero | Silent | - | 395 | - | - |
 | 2-6-H8 | G>A | Hetero | Mis-sense | Asp>Asn | 330 | 0.56 | −2 |
 | 3-2-G8 | C>T | Homo | Silent | - | 359 | - | - |
 | 3-2-F5 | C>T | Hetero | Mis-sense | Thr>Met | 314 | 0.19 | −1 |
 | 4-2-A9 | G>A | Homo | Mis-sense | Ala>Thr | 275 | 0.50 | −3 |
 | 4-1-B1 | C>T | Hetero | Silent | - | 308 | - | - |
 | 4-3-G4 | G>A | Hetero | Mis-sense | Val>Ile | 310 | 0.59 | +2 |
 | 5-8-C8 | C>T | Hetero | Mis-sense | Leu>Phe | 267 | 0.37 | +2 |
 | 6-10-A8 | G>A | Hetero | Silent | - | 287 | - | - |
 | 6-10-F11 | G>A | Hetero | Silent | - | 414 | - | - |
4CL1_B | 2-1-H5 | G>A | Hetero | Mis-sense | Met>Ile | 405 | 0.31 | −3 |
 | 3-4-C10 | C>T | Hetero | Mis-sense | Thr>Met | 345 | 0.11 | −3 |
 | 4-1-E2 | G>A | Hetero | Silent | - | 340 | - | - |
 | 5-8-A10 | G>A | Homo | Mis-sense | Gly>Asp | 370 | 0.28 | −7 |
 | 6-9-G10 | G>A | Hetero | Non-sense | Trp>Stop | 338 | - | - |
4CL1_C | 1-2-D3 | C>T | Hetero | Intronic | - | - | - | - |
 | 1-1-A7 | G>A | Hetero | Intronic | - | - | - | - |
 | 3-4-B7 | C>T | Hetero | Intronic | - | - | - | - |
 | 4-3-B6 | C>T | Hetero | Intronic | - | - | - | - |
 | 5-7-E8 | G>A | Homo | Mis-sense | Val>Ile | 476 | 0.27 | +1 |
 | 5-6-B8 | C>T | Hetero | Silent | Gly | 485 | - | - |
 | 6-9-H8 | C>T | Hetero | Silent | Gly | 534 | - | - |
W1 | 1-2-C5 | G>A | Hetero | Mis-sense | Gly>Ser | 95 | 0.20 | −4 |
 | 1-1-D7 | C>T | Hetero | Mis-sense | Ala>Val | 58 | 0.19 | Not found** |
 | 2-1-H5 | C>T | Hetero | Silent | - | 104 | - | - |
 | 2-5-E5 | C>T | Hetero | Intronic | - | - | - | - |
 | 3-3-B3 | G>A | Homo | Mis-sense | Gly>Glu | 101 | 0.17 | −1 |
 | 3-3-E3 | C>T | Hetero | Intronic | - | - | - | - |
 | 3-2-G3 | C>T | Hetero | Silent | - | 60 | - | - |
 | 4-3-B5 | G>A | Homo | Silent | - | 51 | - | - |
 | 4-4-F9 | G>A | Hetero | Intronic | - | - | - | - |
 | 4-4-G9 | G>A | Hetero | Mis-sense | Arg>His | 153 | 0.09 | +1 |
 | 5-8-E6 | C>T | Homo | Intronic | - | - | - | - |
 | 6-10-F1 | C>T | Hetero | Intronic | - | - | - | - |
 | 6-9-H7 | G>A | Hetero | Mis-sense | Glu>Lys | 143 | 0.14 | −1 |
DOS | 1-4-D8 | G>A | Hetero | Silent | - | 253 | - | - |
 | 1-2-G4 | G>A | Hetero | Mis-sense | Glu>Lys | 328 | 0.12 | −2 |
 | 2-5-D6 | G>A | Hetero | Intronic | - | - | - | - |
 | 2-6-G4 | G>A | Homo | Intronic | - | - | - | - |
 | 3-2-D1 | G>A | Homo | Silent | - | 359 | - | - |
 | 3-3-G9 | G>A | Hetero | Mis-sense | Val>Met | 254 | 0.10 | −6 |
 | 3-4-H2 | C>T | Hetero | Mis-sense | Ala>Val | 305 | 0.13 | −3 |
 | 4-3-F4 | G>A | Homo | Intronic | - | - | - | - |
 | 4-1-H2 | G>A | Hetero | Silent | - | 294 | - | - |
 | 5-7-A8 | C>T | Hetero | Mis-sense | Ala>Val | 399 | 0.11 | +2 |
 | 5-7-D1 | G>A | Hetero | Silent | - | 315 | - | - |
 | 5-5-H1 | C>T | Hetero | Mis-sense | Ala>Val | 252 | 0.10 | +2 |
 | 6-10-E6 | G>A | Hetero | Silent | - | 277 | - | - |
 | 6-9-F6 | C>T | Homo | Silent | - | 346 | - | - |