Table 3 Number and percentage of SNPs identified at different BFRs using Maq-default and Maq-120 analyses
BFR | Maq-default | Maq-120 | ||
|---|---|---|---|---|
| Â | SNPs | % | SNPs | % |
≥ 2.0 | 225 | 13.9% | 464 | 14.6% |
≥ 3.0 | 99 | 6.1% | 212 | 6.7% |
≥ 4.0 | 51 | 3.2% | 113 | 3.6% |
≥ 5.0 | 33 | 2.0% | 75 | 2.4% |
≥ 6.0 | 21 | 1.3% | 43 | 1.4% |
≥ 7.0 | 15 | 0.9% | 36 | 1.1% |
≥ 8.0 | 10 | 0.6% | 28 | 0.9% |
≥ 9.0 | 8 | 0.5% | 22 | 0.7% |
≥ 10.0 | 6 | 0.4% | 12 | 0.4% |