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Table 1 Microsatellites, simples sequence repeat (SSR) class and motif type found with in EST collections positive for SSR loci

From: Gene-based SSR markers for common bean (Phaseolus vulgarisL.) derived from root and leaf tissue ESTs: an integration of the BMc series

Tissue/Library type Genotype/Gene pool EST collection/author EST No. EST-SSRs found 2-nt 3-nt 4-nt 5/6nt % EST-SSRs GenBank entries for ESTs
Leaf cDNA G19833 Blair (2002) 540 64 9 34 21 0 11.9 BQ481427-BQ481965,
Leaf cDNA G19833 Blair (this study) 768 27 10 16 0 1 3.5 HS089176-HS089943
subtotal Andean NA 1308 91 19 50 21 1 7.0 NA
HP root cDNA DOR364 Blair (this study) 862 47 20 23 2 2 5.5 HS103978-HS104836
LP root cDNA DOR364 Blair (this study) 953 46 10 26 0 2 4.8 HS103028-HS103977
subtotal Mesoamerican NA 1815 93 30 49 2 4 5.1 NA
grand total Andean/Meso american NA 3123 184 57 99 23 5 5.9 NA