Seed-specific elevation of non-symbiotic hemoglobin AtHb1: beneficial effects and underlying molecular networks in Arabidopsis thaliana

Table 3 Promoter motifs of differentially expressed genes

Motif (1000 bp upstream)	p-value	Motif (1000 bp upstream)	p-value
*AtHb1*vs. WT upregulated control		*AtHb1*vs. WT downregulated control
ABRE-like binding site motif	< 10e-10	MYCATERD1	< 10e-5
ABRE binding site motif	< 10e-5	AtMYC2 BS in RD22	< 10e-5
ACGT ABRE motif A2OSEM	< 10e-10
ABREATRD22	< 10e-5
GADOWNAT	< 10e-10
Ibox promoter motif	< 10e-5
Z-box promoter motif	< 10e-10
CACGTG motif	< 10e-10
*AtHb1* vs WT upregulated hypoxia		*AtHb1* vs WT downregulated hypoxia
no enrichment		MYCATERD1	< 10e-7
		AtMYC2 BS in RD22	< 10e-7
		RY-repeat promoter motif	< 10e-6
WT hyp vs WT control upregulated		WT hyp vs WT control downregulated
W-box/WRKY	< 10e-5	no enrichment
I-Box	< 10e-7
ABRE-like binding site motif	< 10e-9
ABRE binding site motif	< 10e-7
ACGT ABRE motif A2OSEM	< 10e-10
DRE core motif	< 10e-8
DREB1A/CBF3	< 10e-6
CACGTG motif	< 10e-10
GADOWNAT	< 10e-10
AtMYC2 BS in RD22	< 10e-5
MYCATERD1	< 10e-5
Z-box promoter motif	< 10e-7
EveningElement promoter motif	< 10e-5
*AtHb1* hyp vs *AtHb1* control upregulated		*AtHb1* hyp vs *AtHb1* control downregulated
EveningElement promoter motif	< 10e-5	ABRE-like binding site motif	< 10e-7
		ABRE binding site motif	< 10e-5
		ACGT ABRE motif A2OSEM	< 10e-9
		G-box LERBC	< 10e-5
		GADOWNAT	< 10e-9
		RY-repeat promoter motif	< 10e-6

Overrepresented motifs with p-values < 10e-4 were selected for comparative analysis.

ISSN: 1471-2229