Table 4 Identification of hormone-responsive REGs
REGs with high RARf values | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
REG ID | oct | ABA | Ethylene | BL | CK | Auxin | JA | SA | H2O2 | Drought | DREB1Aox | annotation |
AtREG366 | CACGTGTC | 9.132 | 0 | 0 | 0.344 | 0 | 0 | 0 | 0.492 | 2.747 | 2.631 | ABA |
AtREG367 | CACGTGGC | 6.309 | 0 | 0 | 0.363 | 0 | 0 | 0 | 0 | 2.204 | 2.462 | ABA |
AtREG371 | ACGTGGCG | 6.427 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.066 | 0 | ABA |
AtREG379 | ACGTGGCA | 3.464 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.765 | 2.959 | ABA |
AtREG382 | ACACGTGG | 7.351 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.671 | 0 | ABA |
AtREG389 | ACGTGTCA | 5.964 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.069 | 2.255 | ABA |
AtREG404 | CCCGGCCC | 0 | 0 | 0 | 4.197 | 0 | 0 | 0 | 0 | 0 | 0 | CK |
AtREG408 | CACGTGGA | 6.095 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.406 | 0 | ABA |
AtREG428 | ACGACACG | 5.324 | 3.294 | 0 | 0 | 0 | 2.283 | 0 | 0 | 3.203 | 3.579 | ABA, DREB1Aox, Ethylene, Drought |
AtREG438 | ATGACACG | 3.409 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ABA |
AtREG440 | CACGTCAG | 4.46 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ABA |
AtREG441 | AACCGCGT | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.6 | 3.969 | 0 | Drought |
AtREG446 | ATTGGCCC | 0 | 0 | 0 | 3.137 | 0 | 0 | 0 | 0 | 0 | 0 | CK |
AtREG448 | ATGCCACG | 3.538 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.779 | 4.892 | ABA, DREB1Aox |
AtREG450 | ACGTGGCT | 3.3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ABA |
AtREG453 | CACGTGTA | 5.469 | 0 | 0 | 0 | 0 | 2.59 | 0 | 0 | 2.355 | 4.812 | ABA, DREB1Aox |
AtREG457 | CCGGCCCA | 0 | 0 | 0 | 4.458 | 0 | 0 | 0 | 0 | 0 | 0 | CK |
AtREG460 | CACACGTG | 5.438 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.963 | 3.07 | ABA, DREB1Aox |
AtREG464 | CACGTGGG | 3.333 | 0 | 0 | 0 | 3.9 | 3.086 | 0 | 0 | 0 | 0 | ABA, Auxin, JA |
AtREG466 | CACGTCAC | 3.689 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ABA |
AtREG468 | CGTGGCAG | 3.422 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ABA |
AtREG470 | ACGTGTCT | 5.361 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.964 | 0 | ABA |
AtREG471 | CGTGGCGA | 6.784 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ABA |
AtREG472 | ACGTGTCC | 11.95 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.235 | 4.6 | ABA, DREB1Aox, Drought |
AtREG478 | ACGTGTCG | 10.48 | 0 | 0 | 0 | 0 | 2.285 | 0 | 0 | 3.577 | 4.41 | ABA, DREB1Aox, Drought |
AtREG481 | GACACGTC | 5.088 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ABA |
AtREG488 | CCGCGTTA | 0 | 0 | 0 | 0 | 0 | 0 | 4.104 | 0 | 2.792 | 0 | SA |
AtREG489 | ACGTCACG | 4.287 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4.15 | ABA, DREB1Aox |
AtREG498 | CGTGTCAC | 4.889 | 0 | 0 | 0 | 0 | 0 | 0 | 0.205 | 2.059 | 0 | ABA |
AtREG502 | CCGCGTGA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.834 | 0 | Drought |
AtREG513 | ACGTGGAC | 3.018 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.652 | ABA, DREB1Aox |
AtREG515 | ACGTCAGC | 2.858 | 0 | 0 | 0 | 0 | 0 | 3.413 | 0 | 0 | 0 | SA |
AtREG517 | ACACGTCA | 5.332 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ABA |
AtREG527 | AACGACAC | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.122 | DREB1Aox |
AtREG536 | ACACGCGT | 6.784 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.214 | 0 | ABA, Drought |
AtREG544 | ACCACGTG | 4.347 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.484 | 3.506 | ABA, DREB1Aox |
AtREG547 | ACGTGGAT | 3.101 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.679 | 0 | ABA |
AtREG553 | CAACGGTC | 0 | 0 | 0 | 0 | 5.769 | 0 | 0 | 0 | 0 | 0 | Auxin |
AtREG557 | GACACGTA | 8.185 | 0 | 2.877 | 0 | 0 | 0 | 0 | 0 | 2.998 | 4.66 | ABA, DREB1Aox |
AtREG560 | CCGCCACG | 4.988 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ABA |
AtREG562 | ACGTGTAC | 4.064 | 0 | 0 | 0 | 3.303 | 0 | 0 | 0 | 1.956 | 0 | IN tabl |
AtREG578 | ACGTCATC | 3.34 | 0 | 0 | 0 | 0 | 0 | 1.994 | 0 | 0 | 0 | ABA |
AtREG588 | ACGTGTGA | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.722 | ABA |
AtREG590 | AACACGTG | 7.004 | 0 | 0 | 0 | 0 | 3.541 | 0.36 | 0 | 2.942 | 0 | ABA, JA |
AtREG595 | ACCCCTGA | 0 | 0 | 0 | 3.817 | 0 | 0 | 0 | 0 | 0 | 0 | CK |
AtREG606 | ACGTGACA | 3.205 | 0 | 0 | 0 | 0 | 1.855 | 2.391 | 0 | 0 | 0 | ABA |
AtREG608 | AAGCCACG | 3.053 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ABA |
AtREG612 | GGCCCACA | 0 | 0 | 0 | 2.858 | 0 | 0 | 0 | 0 | 0 | 3.327 | DREB1Aox |
AtREG615 | GGGACCCA | 4.26 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ABA |
AtREG628 | ACACGTGA | 2.672 | 0 | 0 | 0 | 0 | 2.835 | 0 | 1.888 | 1.899 | 3.637 | DREB1Aox |
AtREG631 | CGCGTGAA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.332 | 0 | Drought |
AtREG638 | AGTCGGTC | 5.571 | 0 | 0 | 0 | 0 | 0 | 2.771 | 0 | 0 | 9.436 | DREB1Aox, ABA |
AtREG646 | CGTAATTA | 3.016 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | ABA |