Table 1 The top 10 novel miRNAs predicted from both arms of the miRNA precursor
From: Characterization of the stress associated microRNAs in Glycine maxby deep sequencing
miRID | Location | Strand (+/-) | Energy (kcal/mol) | Sequence of 5p | Sequence of 3p | Mock (count) | Drought (count) | Salinity (count) | Alkalinity (count) | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | Â | Â | Â | 5p | 3p | 5p | 3p | 5p | 3p | 5p | 3p |
Gma-m001 | Gm18:61442586:61442692 | - | -44.1 | CTGACAGAAGATAGAGAGCAC | - | 3395 | - | 3248 | - | 4830 | - | 2216 | - |
Gma-m002 | Gm02:837420:837549 | + | -56.5 | CAGGGGAACAGGCAGAGCATG | - | 3672 | - | 2573 | - | 2945 | - | 3159 | - |
Gma-m003 | Gm12:3176108:3176377 | + | -69.67 | TCCATTGTCGTCCAGCGGTTA | - | 3282 | - | 3673 | - | 2931 | - | 1186 | - |
Gma-m004 | Gm19:40699070:40699221 | - | -65.8 | TGGGTGAGAGAAACGCGTATC | TACGGGTCGCTCTCACCTAGG | 367 | 879 | 491 | 1053 | 186 | 1083 | 125 | 329 |
Gma-m005 | Gm14:5324794:5324912 | + | -44 | AGCCAAGAATGACTTGCCGGAA | CGGGCAAGTTGTTTTTGGCTAC | 337 | 560 | 475 | 644 | 438 | 471 | 175 | 173 |
Gma-m006 | Gm09:16565920:16566038 | - | -44.7 | AGAGGTGTTTGGGATGAGAGA | CCTCATTCCAAACATCATCTAA | 1596 | 102 | 1695 | 138 | 777 | 128 | 335 | 53 |
Gma-m007 | Gm18:61452908:61452997 | - | -41 | GGAATGGGCTGATTGGGAAGT | - | 835 | - | 781 | - | 813 | - | 598 | - |
Gma-m008 | Gm02:30498945:30499130 | - | -70.5 | CTGGGTGAGAGAAACACGTAT | ACGGGTCGCTCTCACCTGGAG | 85 | 665 | 170 | 635 | 78 | 714 | 43 | 264 |
Gma-m009 | Gm13:34382988:34383131 | - | -57.37 | TCATTGAGTGCAGCGTTGATG | TATTGACGCTGCACTCAATCA | 332 | 811 | 187 | 744 | 202 | 340 | 142 | 227 |
Gma-m010 | Gm06:10859290:10859391 | - | -33.76 | - | CGAGCCGAATCAATACCACTC | - | 658 | - | 693 | - | 515 | - | 355 |