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Table 3 Differential transcript level of HD-Zip III genes in developing secondary xylem from P. trichocarpa × P. deltoides (clone H-1111) following removal of the apex or application of an auxin transport inhibitor (NPA), compared to untreated controls.

From: Gene family structure, expression and functional analysis of HD-Zip III genes in angiosperm and gymnosperm forest trees

Gene

Treatment

Log2-fold difference

SD1

p-value2

PtdHB1

apex (-)

-0.5062

1.17

0.1092

 

NPA

-1.201

1.09

0.0270*

PtdHB2

apex (-)

0.4671

1.17

0.4777

 

NPA

-0.4111

0.89

0.4307

PtdHB3

apex (-)

0.1637

0.91

0.4663

 

NPA

-0.4473

0.71

0.4762

PtdHB5

apex (-)

-1.9739

0.69

0.0461*

 

NPA

-2.0375

1.22

0.0496*

PtdHB6

apex (-)

-0.9145

0.91

0.1346

 

NPA

-1.4915

1.14

0.1090

PtdHB7

apex (-)

-1.6421

0.76

0.0776

 

NPA

-1.3204

1.26

0.1725

PtdHB8

apex (-)

-0.5686

0.98

0.1488

 

NPA

-0.7031

1.93

0.0455*

  1. 1SD is one standard deviation.
  2. 2p-value is based on Student's t test, N = 2 pools of 3 samples); * indicates the treatment had significant effect a threshold of 0.05