Table 4 Differences between Sanger- and 454-sequences of BAC Cm13_J04.

Homopolymers

length

Sanger ¹

454 differences ²

No.

Motif

A/T

≤10

847

0

11

5

0

12

5

3

(A/T)₁₁

13

3

2

(A/T)₁₂

14

2

1

(A/T)₁₃

15

3

2

(A/T)₁₄

1

(A/T)₁₃

16

1

1

(A/T)₁₄

17

3

2

(A/T)₁₅

18

1

1

(A/T)₁₇

22

1

1

(A/T)₁₉

24

1

0

28

1

1

A₁₅CA₁₃

C/G

5-7

49

0

Other

Sanger

454

(CT)₁₅

(CT)₁₅CTACTTACTTACTTACNNNNNNNC(CT)₁₄

(GA)₂₁

(GA)₂₁GTAGTACGTACN₂₃(GA)₆