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Table 1 Programs used to predict trans-membrane domain of ICMEs of Arabidopsis

From: Characterization, sub-cellular localization and expression profiling of the isoprenylcysteine methylesterase gene family in Arabidopsis thaliana

Programs and their websites Proteins No. of transmembrane domains
DAS
http://www.sbc.su.se/~miklos/DAS/
ICME-LIKE1 6 (loosing cutoff 1.7 ); 2 (strict cutoff 2.2)
  ICME-LIKE2 4 (loosing cutoff 1.7 ); 4 (strict cutoff 2.2)
  ICME 4 (loosing cutoff 1.7 ); 2 (strict cutoff 2.2)
HMMTOP
http://www.enzim.hu/hmmtop/html/submit.html
ICME-LIKE1 2 (N-terminus: OUT)
  ICME-LIKE2 4 (N-terminus: IN)
  ICME 4 (N-terminus: IN)
SOSUI
http://bp.nuap.nagoya-u.ac.jp/sosui/sosui_submit.html
ICME-LIKE1 2
  ICME-LIKE2 2
  ICME NO
TMpred
http://www.ch.embnet.org/software/TMPRED_form.html
ICME-LIKE1 4 (Inside to outside helices);5 (Outside to inside helices)
  ICME-LIKE2 5 (Inside to outside helices);5 (Outside to inside helices)
  ICME 5 (Inside to outside helices);7 (Outside to inside helices)
TMHHM
http://www.cbs.dtu.dk/services/TMHMM-2.0/
ICME-LIKE1 1 (N-terminus: IN)
  ICME-LIKE2 1 (N-terminus: IN)
  ICME 1 (N-terminus: IN)