Table 1 The decamer sequences (all names beginning with OP) and the minisatellite core sequences used as primers in RAPD and DAMD reactions respectively, and the resulting bands in the profiles are listed.
From: Molecular distinction amongst varieties of Mulberry using RAPD and DAMD profiles
Primer | Sequence (5'–3') | Numbers of bands | |
|---|---|---|---|
| Â | Â | Total | Monomorphic |
OP-B1 | GTTTCGCTCC | 5 | 0 |
OP-B2 | TGATCCCTGG | 6 | 1 |
OP-B3 | CATCCCCCTG | 4 | 2 |
OP-B8 | GTCCACACGG | 8 | 1 |
OP-G2 | GGCACTGAGG | 12 | 2 |
OP-G3 | GAGCCCTCCA | 13 | 5 |
OP-G4 | AGCGTGTCTG | 4 | 2 |
OP-G5 | CTGAGACGGA | 6 | 2 |
OP-G8 | TCACGTCCAC | 9 | 0 |
OP-G10 | AGGGCCGTCT | 10 | 3 |
OP-G11 | TGCCCGTCGT | 9 | 2 |
OP-G12 | CAGCTCACGA | 11 | 4 |
OP-G13 | CTCTCCGCCA | 11 | 0 |
OP-G14 | GGATGAGACC | 4 | 1 |
OP-G15 | ACTGGGACTC | 5 | 2 |
OP-G16 | AGCGTCCTCC | 8 | 4 |
OP-G17 | ACGACCGACA | 5 | 3 |
OP-G18 | GGCTCATGTG | 8 | 2 |
OP-G19 | GTCAGGGCAA | 10 | 5 |
OP-AP2 | TGGTCATCCC | 6 | 0 |
OP-AP4 | CTCTTGGGCT | 8 | 2 |
OP-AP6 | GTCACGTCTC | 6 | 0 |
OP-AP12 | GTCTTACCCC | 9 | 1 |
33.6a | GGAGGTTTTCA | 9 | 1 |
HBVb | GGTGTAGAGAGAGGGGT | 7 | 0 |
HVRc | CCTCCTCCCTCCT | 7 | 1 |