The R2R3 MYB transcription factor MdMYB30 modulates plant resistance against pathogens by regulating cuticular wax biosynthesis

Background The MYB transcription factor family is one of the largest transcriptional factor families in plants and plays a multifaceted role in plant growth and development. However, MYB transcription factors involved in pathogen resistance in apple remain poorly understood. Results We identified a new MYB family member from apple, and named it MdMYB30. MdMYB30 was localized to the nucleus, and was highly expressed in young apple leaves. Transcription of MdMYB30 was induced by abiotic stressors, such as polyethylene glycol and abscisic acid. Scanning electron microscopy and gas chromatograph–mass spectrometry analyses demonstrated that ectopically expressing MdMYB30 in Arabidopsis changed the wax content, the number of wax crystals, and the transcription of wax-related genes. MdMYB30 bound to the MdKCS1 promoter to activate its expression and regulate wax biosynthesis. MdMYB30 also contributed to plant surface properties and increased resistance to the bacterial strain Pst DC3000. Furthermore, a virus-based transformation in apple fruits and transgenic apple calli demonstrated that MdMYB30 increased resistance to Botryosphaeria dothidea. Our findings suggest that MdMYB30 plays a vital role in the accumulation of cuticular wax and enhances disease resistance in apple. Conclusions MdMYB30 bound to the MdKCS1 gene promoter to activate its transcription and regulate cuticular wax content and composition, which influenced the surface properties and expression of pathogenesis-related genes to resistance against pathogens. MdMYB30 appears to be a crucial element in the formation of the plant cuticle and confers apple with a tolerance to pathogens. Electronic supplementary material The online version of this article (10.1186/s12870-019-1918-4) contains supplementary material, which is available to authorized users.


Background
Apple (Malus × domestica) is an important fruit crop that is commonly grown worldwide. The gloss and smoothness on apple are important traits that determine the market value of apple, as disease-free shiny fruits are more attractive to consumers. Cuticular wax is responsible for resistance to apple pathogens and gloss.
The plant cuticular structure is composed of two parts based on physical location: the cutin, which is close to the cell wall, and the epicuticular wax, which is exposed to the air. An epicuticular film of wax crystals covers the plant surface [1]. Cuticular wax plays crucial roles protecting against external environmental stress, such as acting as a transpiration barrier and functioning in interactions with pathogens. The basic constituents of plant cuticular wax are very long chain fatty acids (VLCFAs) and their derivatives. The cuticular synthetic pathway can be divided into three reactions: (1) de novo synthesis of C16 and C18 fatty acids; (2) extension of VLCFAs: the C16 and C18 fatty acids produced during the first stage extend on the endoplasmic reticulum to form C20-C36 VLCFAs; and (3) synthesis of derivatives of VLCFA, such as aldehydes, alcohols, alkanes, ketones, and esters [2].
The function of epicuticular wax as a transpiration barrier has been widely investigated. In maize, removing the wax layer on the surface of wild maize promotes the formation of adherent cells of rust on the leaf surface [3]. In addition, the epidermal wax on the surface of the leaf can be used to defend against natural enemies [4]. Some lipids may act as signaling substances during cell apoptosis and defend against external invasion [5].
MYB TFs are common among all eukaryotes; however, this protein family is particularly large in higher plants. The MYB protein family in animals contains three MYB conserved domain repeats (R1, R2, and R3), whereas most plant MYB TFs belong to the R2R3 type, which are associated with growth regulatory processes [6]. MYB proteins are reportedly related to a series of functions regulating secondary metabolism, such as epidermal wax [5], morphogenesis [7], and the abiotic and biotic stress responses [8,9]. The functions of the MYB family members have been widely studied. Overexpressing MYB94 increases total wax load approximately two-fold in Arabidopsis leaves, as MYB94 binds to the promoters of wax-related genes to enhance their expression [10]. Programmed cell death is a hypersensitive response that is closely related to plant disease resistance. AtMYB30 is an active modulator of cell death in both avirulent and virulent pathogen attack responses [11]. MYB30, MYB55, and MYB110 are three MYB proteins that are transcriptionally induced by microbe-associated molecular pattern (MAMP) treatment, which enhance resistance to fungal and bacterial pathogens and have important roles in rice plant immunity [12]. Furthermore, AtMYB30 shows great response to reactive oxygen species (ROS) and inhibits root cell elongation. This process involves multiple genes associated with VLCFA transport; thus, providing a molecular link between ROS -root cell -wax biosynthesis -plant immune responses [13].
The cuticle of fruit crops supplies morphological support for the integrity of the entire fruit and also affects growth and maturation [14]. The composition and content of cuticular wax may lead to differences in quality characteristics, such as post-harvest resistance to water loss, pathogen infection, and cracked fruit [15][16][17]. A large number of studies on fruit wax have concentrated on wax morphology and biosynthesis, whereas little is known about the molecular pathways regulating wax biosynthesis and their roles in apple. Here, we identified an apple R2R3 MYB TF named MdMYB30. Furthermore, ectopically expressing MdMYB30 improved disease resistance by changing the composition and surface properties of the wax. These results demonstrate that MdMYB30 positively regulates wax biosynthesis and acts as a pathogen resistance mechanism.

Identification of the MYB30 gene in apple
To separate the MdMYB30 gene, the AtMYB30 gene was used as bait to search sequences in apple based on homologous retrieval. We chose a gene with the highest homology to AtMYB30, and named it MdMYB30 (MDP0000149102). The MdMYB30 cDNA contained two noncoding regions (Additional file 1: Figure S1), and the MdMYB30 ORF encoded a 342 amino acid polypeptide as predicted by DNAMAN 6.0 software [18]. We analyzed the amino acid sequences of MdMYB30 and AtMYB30. Figure 1a shows that the MdMYB30 and AtMYB30 protein sequences were highly similar and contained conserved R2R3 domains.
A phylogenetic tree was constructed to investigate the evolutionary relationship of MYB30s among species ( Fig. 1b; Additional file 1: File S1). The results indicated that apple MdMYB30 exhibited the closest evolutionary relationship with pear PbMYB30 (XP_009376268), because they were in the same clade. MdMYB30 had the most distant relationship with maize ZmMYB30 (XP_ 008652703.1), wheat TaMYB30 (AYK27536.1), and rice OsMYB30 (BAT05602.1), as all three are monocotyledonous plants. The phylogenetic tree indicated a clear boundary between dicotyledons and monocotyledons.

MdMYB30 is localized in the nucleus and is induced by abiotic stress
The localization of a protein is very important for its function. Figure 2a indicates that the green fluorescent signal and the blue fluorescent signal merged in the nucleus, demonstrating that MdMYB30 localized to the nucleus. The MdMYB30 transcription analysis in various apple tissues showed that although it was constitutively expressed in all examined tissues, the expression levels were different, indicating the specific function of MdMYB30 in its highly expressed tissues (Fig. 2b).
To begin to investigate the MdMYB30 stress response, cis-elements in the MdMYB30 promoter were generated by applying PlantCARE software [19]. A number of regulatory sequences in the MdMYB30 promoter were identified, including elements involved in heat, low-temperature, and drought stressors, elements involved in plants, such as SA, ABA, and GA, and several light-responsive elements ( Table 1), suggesting that MdMYB30 is closely related to plant response to various abiotic stresses.
Subsequently, we analyzed the expression of the MdMYB30 gene treated with osmotic stress (PEG), ABA, GA, or NaCl, respectively (Fig. 2c). In vitro-propagated apple seedlings were used for this experiment. The Data are mean ± SD of three independent replicates. Different lowercase letters indicate significant differences at P < 0.05 MdMYB30 transcript level increased rapidly peaking at 0.5-h, and then gradually declined in the PEG treatment.
MdMYB30 expression did not change during the early stage in response to ABA, but increased sharply after 12-h of treatment and reached its maximum at 48-h. No changes in the MdMYB30 transcript levels were detected after the GA and NaCl treatments.

MdMYB30 functions in biotic and abiotic stress
We transformed MdMYB30 into wild-type Arabidopsis to investigate the role of MdMYB30 during stress. Six independent MdMYB30 ectopically expressing (MdMYB30 OE) Arabidopsis lines as determined by qPCR were obtained. MdMYB30 OE4, OE5, and OE6 with higher MdMYB30 transcription levels were selected for subsequent experiments ( Fig. 3a). We monitored the flg22-induced immune response, PEG-induced osmotic stress, and ABA sensitivity of MdMYB30 to ectopic expression in Arabidopsis. No clear differences were detected between WT and MdMYB30 ectopic expression Arabidopsis in normal MS medium.
MdMYB30 ectopic expression roots were longer under the flg22 or PEG treatment than those in WT. However, the growth of roots in MdMYB30 ectopic expression was significantly inhibited under ABA treatment, compared to the WT. The change in root elongation was more obvious with the increase of flg22, PEG, and ABA concentrations (Fig. 3b, c). Fresh weight and chlorophyll in the MdMYB30 ectopic expression lines improved significantly after the flg22 and PEG treatments, whereas they decreased with the ABA treatment, compared to the WT, indicating that ectopic expression of Arabidopsis seedlings. Arabidopsis chlorophyll μmol/g FW (fresh weight = FW). Error bars represent standard deviation (SD; n = 3). Data are mean ± SD of three independent replicates. Different lowercase letters indicate significant differences at P < 0.05 the MdMYB30 lines increased resistance to biotic stress, osmotic stress, and improved sensitivity to ABA (Fig. 3c-e). Therefore, these data suggest that MdMYB30 participates in the response to biotic and abiotic stress.

MdMYB30 alters epicuticular wax load and composition
Previous studies have demonstrated that AtMYB30 is an important regulator of wax biosynthesis in Arabidopsis [20]. Total wax of MdMYB30 ectopic expression and WT Arabidopsis was extracted to study the function of MdMYB30 in wax accumulation. A significant difference was found in the total wax load between ectopically expressing MdMYB30 and WT Arabidopsis. The total wax load was 1.5-to 1.3-fold higher in the stems and leaves of the MdMYB30 OE lines compared to WT plants ( Fig. 4a; Additional file 1: Figure S2a; Additional file 1: Table S1). Then, GC-MS was applied to determine the stem wax components. The analysis of cuticular wax composition showed that the contents of alkanes, alcohols, aldehydes, fatty acids, ketones, and esters increased in the MdMYB30 ectopic expression lines compared with the WT. Among them, the increase in fatty acids was the largest, which was more than 2.6-fold higher ( Fig. 4b; Additional file 1: Table S2). C29 alkanes, C31 alcohols, C29 aldehydes, C16 fatty acids, C29 ketones, and C29 and C30 esters increased significantly in the MdMYB30 ectopic expression lines compared with those in the WT, providing evidence that MdMYB30 plays an important role in cuticular wax biosynthesis (Additional file 1: Figure S2b). We examined wax crystal morphology in the stems of MYB30 ectopically expressing and WT plants, but did not find a difference in wax crystal morphology using SEM; however, the MdMYB30 ectopically expressing Arabidopsis exhibited more epicuticular wax crystals than the WT (Fig. 4c). Similarly, the wax crystals in ectopically expressing Arabidopsis leaves were also examined, and just a small increase was detected (Additional file 1: Figure S2c). Therefore, expression of MdMYB30 changed the numbers of wax crystals in stems and leaves.
Furthermore, the transcription levels of wax biosynthesis genes, including AtHDG1, AtWRI1, AtCER3, AtWIN1, AtKCS1, AtACBP1, AtLACS2, AtCER1, AtSHINE2, and AtSHINE3 in the WT and MdMYB30 ectopically expressed lines were detected by qRT-PCR. Ectopic expression of MdMYB30 upregulated the transcription of several wax-related genes, such as AtWRI1, AtWIN1, AtKCS1, AtACBP1, AtLACS2, AtSHINE2, and AtSHINE3, indicating that MdMYB30 promotes wax biosynthesis (Fig. 4d). Interestingly, AtKCS1 was significantly upregulated in MdMYB30 ectopic expression plants. Therefore, we analyzed the MdKCS1 promoter sequence and found three motifs (P1, P2, and P3) that might interact with the MdMYB30 protein (Additional file 1: Figure S3). The ChIP-PCR assay was carried out to examine if MdMYB30 directly bound to the MdKCS1 promoter. The results showed that MdMYB30 specifically bound to the TAATTT motif in the P3 sequence of the MdKCS1 promoter to regulate wax synthesis (Fig. 4e).

MdMYB30 functions to change epicuticular wax properties and cuticular permeability
The thickness of the wax layer is associated with cuticular permeability. The chlorophyll leaching assay was performed to investigate whether cuticular membrane properties in MdMYB30 ectopically expressing plants changed. The results indicated that chlorophyll was extracted at a slower rate from MdMYB30 ectopically expressing plants compared to WT (Fig. 5a), suggesting higher cuticular resistance for chlorophyll leaching in the ectopically expressing Arabidopsis. Subsequently, a toluidine blue staining experiment suggested that the MdMYB30 ectopically expressing lines were more difficult to stain than the WT, regardless of whether rosette leaves or stems were stained (Fig. 5b, c). These results indicate that MdMYB30 notably changed the permeability of the cuticular wax.
MdMYB30 confers resistance to Pst DC3000 Cuticular wax acts as both a physical barrier against stressors and pathogens and is a chemical deterrent and activator of the plant defense response. We assessed whether MdMYB30 affected resistance to Pst DC3000, which is a kind of bacterial pathogen. The results showed that WT leaves exhibited yellowing after 3 days of inoculation with Pst DC3000; however, the leaves of the MdMYB30 ectopically expressing lines showed little yellowing. Susceptibility became more and more serious through time, and almost all WT rosette leaves developed chlorosis after 13 d of infection, whereas the leaves of the ectopically expressed lines were healthier at all time points examined, suggesting that MdMYB30 ectopic expression conferred resistance to the pathogen  (Fig. 6a). ROS levels are closely associated with a pathogen infection. To test whether the ectopically expressing lines had altered ROS levels after inoculation with Pst DC3000 for 5 d, the ROS reactive dyes DAB and NBT were used to test O 2 − and H 2 O 2 contents in infected rosette leaves. The results showed that ectopically expressing MdMYB30 stained strongly, whereas weak staining was observed in the WT (Fig. 6c-f). Correspondingly, callose content improved in the ectopically expressing lines after the Pst DC3000 infection compared to the WT (Fig. 6b), demonstrating that MdMYB30 enhanced resistance to Pst DC3000.

MdMYB30 positively regulates B. dothidea attack via transient transformation in apple fruits
The expression of MdMYB30 was increased or repressed using viral vector-based transient transformation to confirm the function of MdMYB30 in enhancing resistance against pathogens in apple. Here, independent MdMYB30-TRV and MdMYB30-pIR transient expression of MdMYB30   Fig. 6 Ectopic expression of MdMYB30 in Arabidopsis increases resistance to Pst DC3000. a Phenotypes of WT, MdMYB30 OE4, OE5, and OE6 infected with Pst DC3000 for 0, 3, 5, 7, and 13 days (scale bars: 1 cm). b Callose deposition of WT and MdMYB30 ectopic expression Arabidopsis infected with Pst DC3000 for 5 days (scale bars: 500 μm). c 3′,3′-Diaminobenzidine (DAB) staining for H 2 O 2 in the leaves of WT and MdMYB30 ectopic expression Arabidopsis infected with Pst DC3000 for 5 days. d DAB staining areas and intensity were determined with ImageJ software. e Nitroblue tetrazolium (NBT) staining for superoxide in the leaves of the WT and MdMYB30 ectopic expression Arabidopsis infected with Pst DC3000 for 5 days. f NBT staining areas and intensity were determined with ImageJ software. Bars with different letters are significantly different at P < 0.05 according to Tukey's single factor test. Data are mean ± standard deviation. At least three biological repetitions were performed mRNA levels was downregulated or significantly upregulated, respectively (Fig. 7a). First, we detected the transcription of wax-related genes at the injection point, and three wax-related genes were positively correlated with MdMYB30 expression (Fig. 7b). Furthermore, overexpression of MdMYB30 accelerated the numbers of wax crystals around the injection sites according to SEM, compared to the control (Fig. 7c). Correspondingly, overexpression of MdMYB30  significantly, while its suppression increased the lesions, compared to the empty vector (Fig. 7d, e). The qRT-PCR results demonstrated that transcription of pathogenesisrelated genes, including MdNPR1, MdPR1, MdPR5, MdEDS1, and MdPAL decreased at the TRV-MdMYB30 injection sites and increased at the pIR-MdMYB30 injection sites compared with the controls (Fig. 7f). Subsequently, the function of MdMYB30 in disease resistance was confirmed in apple calli. We overexpressed MdMYB30 in apple calli and obtained three MdMYB30 overexpressing (MdMYB30 OX) transgenic lines (Fig. 8a). Then, we tested the immunity of apple calli to B. dothidea, and found that overexpressing MdMYB30 notably reduced the lesions compared to that of the empty vector (Fig. 8b, c). MdMYB30 OX transgenic apple calli had higher levels of H 2 O 2 than Empty Vector (Fig. 8d). These findings demonstrate that MdMYB30 positively regulates wax accumulation in apple fruit, and strengthened apple resistance to B. dothidea.

Discussion
Epicuticular wax participates in many physiological processes and is the main protective substance in the aerial parts of plants. MYB TFs participated in numerous processes [6,21,22]. Several R2R3 type MYB TFs play essential roles in biological stress through a possible cuticular-dependent pathway [23,24], but the role of R2R3-MYB proteins in disease resistance is poorly understood in apple.
Protein subcellular localization is closely related to its function. It was reported that many MYB proteins are localized in the nucleus. In wheat (Triticum aestivum L.), TaMYB1 is localized in the nucleus as indicated by an in vivo subcellular targeting experiment in onion epidermal cells [25]. In Arabidopsis, MYB21 and MYB24 are localized in the nucleus where they interact with MYC2/3/4/5 proteins to modulate stamen growth and seed production through a bHLH-MYB complex [26]. The nuclear localized transcription factor MYB2 interacts with bHLH proteins in Apium graveolens to regulate anthocyanin biosynthesis [27]. In this study, the MdMYB30 fluorescence signal indicated that it was located in the nucleus, demonstrating that MdMYB30 as a transcription factor (TF) might target the genes localized in the nucleus that are involved in wax synthesis.
Plant MYB TFs play important roles in regulatory pathways and networks facing various stressors. In L. purpureus, LpMYB1 ectopically expressing Arabidopsis exhibits enhanced drought and salt resistance compared to WT [28]. In Arabidopsis, AtMYC2 and/or AtMYB2 overexpressing plants show higher sensitivity to ABA and several ABA-inducible genes are upregulated, indicating that both proteins transcriptionally activate the expression of the ABA-inducible gene under drought stress [22]. In our study, ectopic expression of MdMYB30 in Arabidopsis improved the responses to abiotic (PEG and ABA) and biotic (flg22 and B. dothidea) stressors.
Previous studies have shown that cuticular wax is mainly composed of alkanes, alcohols, aldehydes, free acids, ketones, and esters. Among them, alkanes account for 40-60%, alcohols account for 15-20%, aldehydes account for 5-10%, free acids account for 5-9%, ketones account for 15-20%, and esters account for < 10% of wax content. Increased alkane content in Arabidopsis has the greatest impact on total wax quality [29][30][31]. Our results show that wax content of each component is consistent with previous ones and the most obvious increase in wax content was fatty acids, compared to WT. We suspect that fatty acids may play a role in disease resistance of the plant epidermis. Studies of Arabidopsis long-chain acyl-CoA synthetase2 (LACS2) mutants have demonstrated that modifications in epidermal wax component, structure, and permeability may result in strong resistance to Botrytis cinerea [32]. An increase in wax content usually causes changes in the crystalline structure and quantity of wax crystals [33,34]. Here, epidermal wax load and the number of wax crystals increased in MdMYB30 ectopic expression Arabidopsis, which was possibly due to altered epidermal wax composition.
Previous reports indicate that the AtKCS1, AtFDH, and AtDH3 genes are involved in VLCFA biosynthetic pathways. MYB30 directly activates the promoters of these genes to modulate cell death by increasing the biosynthesis of VLCFAs in the endoplasmic reticulum [5]. Transcription of the cuticular wax-related gene MYB96 was induced by drought and ABA and specifically bound to the promoter regions of several structural genes associated with wax biosynthesis. The increased wax content subsequently leads to enhanced drought tolerance in plants [35]. Our results demonstrate that enzyme-encoding genes and TFs increased significantly in MdMYB30 ectopic expression Arabidopsis compared to WT. Among them, AtKCS1 was the most obvious, which is consistent with MdMYB30 binding to the MdKCS1 promoter, thereby activating its expression.
As toluidine blue directly enters plant tissues without a solvent, this method can be used to study permeability of the cuticular membrane [32]. We used the toluidine blue staining assay to determine epidermal wax permeability. A previous study showed that Vicia faba leaves infected with bean yellow mosaic virus exhibit higher H 2 O 2 and MDA levels compared to controls [36]. Here, the MdMYB30 transgenic apple calli and ectopically expressing Arabidopsis leaves exhibited more O 2 − and H 2 O 2 contents than the WT after treatment with Pst DC3000 and B. dothidea for 4 days, respectively. Actually, a burst of ROS is considered one of the earliest responses to a biotic stress [37]. The ROS burst enhances plant disease resistance and increases changes in the cell walls [38]. These findings support previous views and confirm that MdMYB30 positively regulates plant disease resistance.

Conclusions
In conclusion, we present evidence that MdMYB30 improved plant disease resistance and we propose a working model to explain this process (Fig. 9). Briefly, the TF MdMYB30 regulates the biosynthesis of cuticular wax by activating the expression of MdKCS1. Thus, ectopically expressing MdMYB30 significantly increased the total amount of cuticular wax and changed its composition; therefore, changing the surface properties and pathogenesis-related genes to resist against pathogens.

Plant materials and growth conditions
'Orin' apple calli (wild type) were cultured in the dark at 23-25°C and subcultured every 3 weeks. The 'Royal Gala' tissue culture seedlings were cultured at 23-25°C under a 16 h/8 h photoperiod and subcultured once per month. The subcultured mediums used were followed by [39]. Arabidopsis (ecotype 'Columbia') were grown in a long-day ( Individual apple tissues were taken from 5-year-old 'Royal Gala' trees for the tissue expression experiments. The apple seedling treatment method for the stress response experiments followed that described previously [40]. The apple fruits were sampled 140 days after blooming from 'Golden Delicious' trees. B. dothidea was grown on potato dextrose agar (PDA) medium at 24°C [41].
'Orin' apple calli was given by Prof. Takaya Moriguchi of the National Institute of Fruit Tree Science, Japan. 'Royal Gala' trees were obtained from the experimental station of Shandong Agricultural University. 'Golden Delicious' fruits were obtained from a commercial orchard Fig. 9 A model of MdMYB30 regulated wax-related pathogen resistance near Tai-An City. We declare that the collection of plant materials comply with institutional, national, or international guidelines.

Phylogenetic tree construction and amino-acid sequence analysis
The homologs of Arabidopsis MYB30 were obtained from the Protein BLAST program (http://www.ncbi.nlm.nih. gov/BLAST/). The phylogenetic tree and multiple sequence alignments were made using MEGA 7.0 and DNAMAN 6.0 software, respectively. MEME Suite (http:// meme-suite.org/) software was used to obtain the functional motifs of the MYB30S. The MdMYB30 protein structural domain was predicted through NCBI website (https://www.ncbi.nlm.nih.gov/Structure/cdd/wrpsb.cgi).

Plasmid construction and plant genetic transformation
Leaves of 'Royal Gala' tissue-cultured seedlings were used to extract RNA to clone MdMYB30 cDNA. The 1026 bp MdMYB30 cDNA was amplified using the MdMYB30-PRI-F (5′-GTCGACATGGGGAGGCCTCCTTGCT-3′) and MdMYB30-PRI-R (5′-GGATCC GAAAAAGTTAGCATT TCCATGATCT-3′) primers, designed with the SalI and BamHI restriction endonuclease sites, respectively. To obtain the MdMYB30-GFP fusion protein, the amplification product was inserted into PRI-GFP. Transformations of apple calli and Arabidopsis followed the methods described in [42,43], respectively.

Subcellular localization
The full length MdMYB30 sequence was inserted into the GFP vector to construct the recombinant plasmid MdMYB30-GFP. 35S::MdMYB30-GFP, which was used to transform tobacco [44]. The fluorescent signals were detected using a laser scanning confocal microscope (Zeiss LSM 510 META, Jena, Germany).
Wax extraction, gas chromatography-mass spectrometry (GC-MS) analysis, and scanning electron microscopy (SEM) Cuticular wax was extracted exhaustively using the following steps: chloroform extraction, nitrogen blow drying, derivatization reaction, and sample analysis following that described previously [39,45]. SEM was performed as described previously [39]. The steps can be summarized as: sampling, vacuum freeze drying, gold spray treatment, observation of the mirror.

Chromatin immunoprecipitation (ChIP)-polymerase chain reaction (PCR) analysis
The ChIP-PCR analysis was performed using the Epi-Tect ChIP OneDay Kit following the method described by [46]. The primers used in the ChIP-PCR analysis are listed in Additional file 1: Table S3.

Gene expression analysis
Plant total RNAs were isolated using the RNA plant Plus Reagent Kit (Tiangen, Beijing, China) and TRIzol reagent (Invitrogen, Carlsbad, CA, USA). Reverse transcription was performed using the PrimeScript™ RT reagent Kit with the gDNA Eraser (TaKaRa, Shiga, Japan). The quantitative RT-PCR assay was carried out using the Step One Plus™ Real-Time PCR System (Thermo Fisher Scientific, Waltham, MA, USA) to examine the transcription level of the wax and disease resistance-related genes. The qRT-PCR was performed according to [47]. The primers used for qRT-PCR are listed in Additional file 1: Table S3.

Chlorophyll leaching assay
The rosettes from 4-week-old seedlings were sampled. Chlorophyll content was determined following methods described previously [48,49].

Toluidine blue staining
Toluidine blue staining was performed to detect leaf surface permeability, and carried out according to [45].

Pathogen infection assays
Leaves of WT and transgenic Arabidopsis were sampled and infected as described previously [50]. The Arabidopsis infection analysis with the bacterial strain Pseudomonas syringae pv tomato DC3000 (Pst DC3000) was carried out as described by [51]. Pst DC3000 is a model bacterial strain for the interaction between Arabidopsis and pathogenic bacteria. The inoculation of apple calli with B. dothidea was performed according to [50].

Callose staining
Four days after infecting with Pst DC3000, the leaves were rinsed 20 h in fixative solution (formaldehyde: acetic acid: ethanol: H 2 O, 3.7%: 5%: 50%: 41.3%, by vol.). The sample was removed from the fixative and soaked with 8 M NaOH for 5-6 h; the NaOH was removed and the sample was washed with deionized water for 10 min; the water was removed, and 0.01% (w/v) aniline blue dye solution was added in the dark for 1 h. The quantitative statistics of the callose deposits was carried out using ImageJ software as described previously [50].

Construction of the viral vectors and agroinfiltration of apple fruit
Viral vectors were used as described by [54]. The primer pairs MdMYB30-F (5′-ATGGGGAGGCCTCCTTGCT-3′)/−R (5′-GAAAAAGTTAGCATTTCCATGATCT-3′) were used to amplify the full-length MdMYB30, which was inserted into the pIR vector to generate the pIR-MdMYB30 construct (Additional file 1: Table S3). Then, a portion of the full-length cDNA of MdMYB30 (15-348 bp) was cloned and inserted into the tobacco rattle virus (TRV) vector in an antisense orientation to obtain the antisense construct TRV-MdMYB30. The instant injection method was used as described by [55]. After the injection, the fruit was placed in the dark for 3 days at room temperature, after which Botryosphaeria dothidea was inoculated at the injection point with an inoculating loop, placed in the dark at room temperature under humid conditions, and the proliferation of B. dothidea was observed after 3 days.

Statistical analysis
Each experiment was set up with three times repetitions and the data are based on the results of three parallel experiments. The data were analyzed for significance using Data Processing System (DPS) (http://www.chinadps. net/). Tukey's single factor test was used. All datasets were analyzed in the same way. A p-value < 0.05 was considered significant.

Additional file
Additional file 1: Figure S1. Schematic diagram of MdMYB30 genomic and cDNA sequences. UTR: untranslated region. Figure S2. Changes in wax load, composition, and cuticular wax crystal morphology of WT plants and MdMYB30 ectopic expression plants detected by scanning electron microscopy. a Total cuticular wax content of leaves, calculated per unit area of 6-week-old Arabidopsis from the WT and MdMYB30 ectopic expression lines. b Cuticular wax composition of alkanes, alcohols, aldehydes, fatty acids, ketones, and esters on the stem surfaces of WT and MdMYB30 ectopic expression plants analyzed by GC-MS. Wax constituents are grouped by carbon chain length and chemical class. c Wax crystal morphology of 6-week-old Arabidopsis leaves from the WT and MdMYB30 ectopic expression lines (scale bars: 10 μm). Error bars represent standard deviation (SD; n = 3). Data are mean ± SD of three independent replicates. Different lowercase letters indicate significant differences at P < 0.05. Figure S3. Diagram representing the genomic structure and primer sets (indicated by P1-P3) analyzed in the MdKCS1 genes by ChIP-qPCR. White boxes represent primer sets, and black boxes represent ATG starting open reading frame (ORF). Table S1. Total epicuticular wax on wild type Arabidopsis, MdMYB30 OE4, OE5, and OE6 surface areas.