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  1. The identification of endogenous cis-regulatory DNA elements (CREs) responsive to endogenous and environmental cues is important for studying gene regulation and for biotechnological applications but is labor and...

    Authors: Mario Roccaro, Nahal Ahmadinejad, Thomas Colby and Imre E Somssich
    Citation: BMC Plant Biology 2013 13:164
  2. Sugarcane mosaic virus (SCMV) disease causes substantial losses of grain yield and forage biomass in susceptible maize cultivars. Maize resistance to SCMV is associated with two dominant genes, Scmv1 and Scmv2, w...

    Authors: Yongfu Tao, Lu Jiang, Qingqing Liu, Yan Zhang, Rui Zhang, Christina Roenn Ingvardsen, Ursula Karoline Frei, Baobao Wang, Jinsheng Lai, Thomas Lübberstedt and Mingliang Xu
    Citation: BMC Plant Biology 2013 13:162
  3. Field pea (Pisum sativum L.) is a self-pollinating, diploid, cool-season food legume. Crop production is constrained by multiple biotic and abiotic stress factors, including salinity, that cause reduced growth an...

    Authors: Antonio Leonforte, Shimna Sudheesh, Noel OI Cogan, Philip A Salisbury, Marc E Nicolas, Michael Materne, John W Forster and Sukhjiwan Kaur
    Citation: BMC Plant Biology 2013 13:161
  4. Wounded leaves of Arabidopsis thaliana produce reactive oxygen species (ROS) within minutes after wounding and become resistant to the pathogenic fungus Botrytis cinerea at a local level. This fast response of th...

    Authors: Emna Beneloujaephajri, Alex Costa, Floriane L’Haridon, Jean-Pierre Métraux and Matteo Binda
    Citation: BMC Plant Biology 2013 13:160
  5. Flax (Linum usitatissimum L.) is an economically important fiber and oil crop that has been grown for thousands of years. The genome has been recently sequenced and transcriptomics are providing information on ca...

    Authors: Maxime Chantreau, Sébastien Grec, Laurent Gutierrez, Marion Dalmais, Christophe Pineau, Hervé Demailly, Christine Paysant-Leroux, Reynald Tavernier, Jean-Paul Trouvé, Manash Chatterjee, Xavier Guillot, Véronique Brunaud, Brigitte Chabbert, Olivier van Wuytswinkel, Abdelhafid Bendahmane, Brigitte Thomasset…
    Citation: BMC Plant Biology 2013 13:159
  6. High temperature stress responses are vital for plant survival. The mechanisms that plants use to sense high temperatures are only partially understood and involve multiple sensing and signaling pathways. Here...

    Authors: Erin J Kast, Minh-Duyen T Nguyen, Rosalie E Lawrence, Christina Rabeler and Nicholas J Kaplinsky
    Citation: BMC Plant Biology 2013 13:158
  7. The formation of functional symbiotic nodules is the result of a coordinated developmental program between legumes and rhizobial bacteria. Genetic analyses in legumes have been used to dissect the signaling pr...

    Authors: Agota Domonkos, Beatrix Horvath, John F Marsh, Gabor Halasz, Ferhan Ayaydin, Giles ED Oldroyd and Peter Kalo
    Citation: BMC Plant Biology 2013 13:157
  8. In plants, carotenoids serve as the precursors to C13-norisoprenoids, a group of apocarotenoid compounds with diverse biological functions. Enzymatic cleavage of carotenoids catalysed by members of the carotenoid...

    Authors: Justin G Lashbrooke, Philip R Young, Samantha J Dockrall, Krishnan Vasanth and Melané A Vivier
    Citation: BMC Plant Biology 2013 13:156
  9. The terpenoid indole alkaloid (TIA) pathway leads to the production of pharmaceutically important drugs, such as the anticancer compounds vinblastine and vincristine. Unfortunately, these drugs are produced in...

    Authors: Chun Yao Li, Alex L Leopold, Guy W Sander, Jacqueline V Shanks, Le Zhao and Susan I Gibson
    Citation: BMC Plant Biology 2013 13:155
  10. Bolting reduces the quality and commercial yield of Welsh onion (Allium fistulosum L.) in production. However, seed production is directly dependent on flower induction and bolting. The Welsh onion belongs to the...

    Authors: Yinxin Dong, Zhihui Cheng, Huanwen Meng, Hanqiang Liu, Cuinan Wu and Abdul Rehman Khan
    Citation: BMC Plant Biology 2013 13:154
  11. Global warming predictions indicate that temperatures will increase by another 2-6°C by the end of this century. High temperature is a major abiotic stress limiting plant growth and productivity in many areas ...

    Authors: Yong-Fang Li, Yixing Wang, Yuhong Tang, Vijaya Gopal Kakani and Ramamurthy Mahalingam
    Citation: BMC Plant Biology 2013 13:153
  12. Tamarix spp. are woody halophyte, which are very tolerant to abiotic stresses such as salinity and drought, but little is known about their specific stress response systems. Basic leucine zipper proteins (bZIPs) ...

    Authors: Xiaoyu Ji, Guifeng Liu, Yujia Liu, Lei Zheng, Xianguang Nie and Yucheng Wang
    Citation: BMC Plant Biology 2013 13:151
  13. The rice transcription factor WRKY45 plays a crucial role in salicylic acid (SA)/benzothiadiazole (BTH)-induced disease resistance. Its knockdown severely reduces BTH-induced resistance to the fungal pathogen Mag...

    Authors: Akira Nakayama, Setsuko Fukushima, Shingo Goto, Akane Matsushita, Masaki Shimono, Shoji Sugano, Chang-Jie Jiang, Aya Akagi, Muneo Yamazaki, Haruhiko Inoue and Hiroshi Takatsuji
    Citation: BMC Plant Biology 2013 13:150
  14. Cultivated grapevines, Vitis vinifera subsp. sativa, evolved from their wild relative, V. vinifera subsp. sylvestris. They were domesticated in Central Asia in the absence of the powdery mildew fungus, Erysiphe n...

    Authors: Summaira Riaz, Jean-Michel Boursiquot, Gerald S Dangl, Thierry Lacombe, Valerie Laucou, Alan C Tenscher and M Andrew Walker
    Citation: BMC Plant Biology 2013 13:149
  15. WRKY genes encode one of the most abundant groups of transcription factors in higher plants, and its members regulate important biological process such as growth, development, and responses to biotic and abiot...

    Authors: Guangjun Yin, Hongliang Xu, Shuyang Xiao, Yajuan Qin, Yaxuan Li, Yueming Yan and Yingkao Hu
    Citation: BMC Plant Biology 2013 13:148
  16. Grafting is widely used in the agriculture of fruit-bearing crops; rootstocks are known to confer differences in scion biomass in addition to improving other traits of agricultural interest. However, little is...

    Authors: Sarah Jane Cookson and Nathalie Ollat
    Citation: BMC Plant Biology 2013 13:147
  17. Crambe abyssinica produces high erucic acid (C22:1, 55-60%) in the seed oil, which can be further increased by reduction of polyunsaturated fatty acid (PUFA) levels. The omega-6 fatty acid desaturase enzyme (FAD2...

    Authors: Jihua Cheng, Li-Hua Zhu, Elma MJ Salentijn, Bangquan Huang, Jens Gruber, Annemarie C Dechesne, Frans A Krens, Weicong Qi, Richard GF Visser and Eibertus N van Loo
    Citation: BMC Plant Biology 2013 13:146
  18. Maize rough dwarf disease (MRDD) is a devastating viral disease that results in considerable yield losses worldwide. Three major strains of virus cause MRDD, including maize rough dwarf virus in Europe, Mal de...

    Authors: Yongfu Tao, Qingcai Liu, Honghong Wang, Yanjun Zhang, Xinyi Huang, Baobao Wang, Jinsheng Lai, Jianrong Ye, Baoshen Liu and Mingliang Xu
    Citation: BMC Plant Biology 2013 13:145
  19. The ubiquitous, non-proteinaceous amino acid GABA (γ-aminobutyrate) accumulates in plants subjected to abiotic stresses such as chilling, O2 deficiency and elevated CO2. Recent evidence indicates that controlled ...

    Authors: Christopher P Trobacher, Adel Zarei, Jingyun Liu, Shawn M Clark, Gale G Bozzo and Barry J Shelp
    Citation: BMC Plant Biology 2013 13:144
  20. Leaves are determinate organs; hence, precise control of cell proliferation and post-mitotic cell expansion is essential for their growth. A defect in cell proliferation often triggers enhanced post-mitotic ce...

    Authors: Kensuke Kawade, Gorou Horiguchi, Naoko Ishikawa, Masami Yokota Hirai and Hirokazu Tsukaya
    Citation: BMC Plant Biology 2013 13:143
  21. Yellow mustard (Sinapis alba L.) is an important condiment crop for the spice trade in the world. It has lagged behind oilseed Brassica species in molecular marker development and application. Intron length polym...

    Authors: Farzad Javidfar and Bifang Cheng
    Citation: BMC Plant Biology 2013 13:142
  22. The genetics and molecular biology of sesame has only recently begun to be studied even though sesame is an important oil seed crop. A high-density genetic map for sesame has not been published yet due to a la...

    Authors: Yanxin Zhang, Linhai Wang, Huaigen Xin, Donghua Li, Chouxian Ma, Xia Ding, Weiguo Hong and Xiurong Zhang
    Citation: BMC Plant Biology 2013 13:141
  23. MicroRNAs (miRNAs) are a class of regulatory small RNAs (sRNAs) that down-regulate target genes by mRNA degradation or translational repression. Numerous plant miRNAs have been identified. Evidence is increasi...

    Authors: Fanrong Meng, Hao Liu, Ketao Wang, Lulu Liu, Shaohui Wang, Yanhong Zhao, Jun Yin and Yongchun Li
    Citation: BMC Plant Biology 2013 13:140
  24. We have identified a kind of parthenocarpy in zucchini squash which is associated with an incomplete andromonoecy, i.e. a partial conversion of female into bisexual flowers. Given that andromonoecy in this and...

    Authors: Cecilia Martínez, Susana Manzano, Zoraida Megías, Dolores Garrido, Belén Picó and Manuel Jamilena
    Citation: BMC Plant Biology 2013 13:139
  25. Plants that utilize the highly efficient C4 pathway of photosynthesis typically possess kranz-type leaf anatomy that consists of two morphologically and functionally distinct photosynthetic cell types, the bundle...

    Authors: Shaun M Bowman, Minesh Patel, Pradeep Yerramsetty, Christopher M Mure, Amy M Zielinski, Jeremy A Bruenn and James O Berry
    Citation: BMC Plant Biology 2013 13:138
  26. Glutamine Synthetase (GS, EC 6.3.1.2) is a central enzyme in nitrogen metabolism, and a key component of nitrogen use efficiency (NUE) and plant yield and thus it is extremely important to understand how it is...

    Authors: Ana R Seabra, Liliana S Silva and Helena G Carvalho
    Citation: BMC Plant Biology 2013 13:137
  27. Wheat gluten has unique nutritional and technological characteristics, but is also a major trigger of allergies and intolerances. One of the most severe diseases caused by gluten is coeliac disease. The peptid...

    Authors: Fernando Pistón, Javier Gil-Humanes and Francisco Barro
    Citation: BMC Plant Biology 2013 13:136
  28. Translationally controlled tumour protein (TCTP), a well known protein of the animal kingdom, was shown to be a Ca2+-binding protein with important functions in many different cellular processes (e.g. protection ...

    Authors: Marion Christine Hoepflinger, Johannes Reitsamer, Anja Maria Geretschlaeger, Norbert Mehlmer and Raimund Tenhaken
    Citation: BMC Plant Biology 2013 13:135
  29. Aluminium (Al) toxicity is considered to be one of the major constraints affecting crop productivity on acid soils. Being a trait governed by multiple genes, the identification and characterization of novel tr...

    Authors: Ana Luísa Garcia-Oliveira, César Benito, Pilar Prieto, Regina de Andrade Menezes, Claudina Rodrigues-Pousada, Henrique Guedes-Pinto and Paula Martins-Lopes
    Citation: BMC Plant Biology 2013 13:134
  30. In a previous study we have shown that wounding of Arabidopsis thaliana leaves induces a strong and transient immunity to Botrytis cinerea, the causal agent of grey mould. Reactive oxygen species (ROS) are formed...

    Authors: Lehcen Benikhlef, Floriane L’Haridon, Eliane Abou-Mansour, Mario Serrano, Matteo Binda, Alex Costa, Silke Lehmann and Jean-Pierre Métraux
    Citation: BMC Plant Biology 2013 13:133
  31. As the final stage of leaf development, leaf senescence may cause the decline of photosynthesis and gradual reduction of carbon assimilation, which makes it a possible limiting factor for crop yield. NACs are ...

    Authors: Yong Zhou, Weifeng Huang, Li Liu, Taiyu Chen, Fei Zhou and Yongjun Lin
    Citation: BMC Plant Biology 2013 13:132
  32. Cellulose is an integral component of the plant cell wall and accounts for approximately forty percent of total plant biomass but understanding its mechanism of synthesis remains elusive. CELLULOSE SYNTHASE A ...

    Authors: Pubudu P Handakumbura, Dominick A Matos, Karen S Osmont, Michael J Harrington, Kyuyoung Heo, Kabindra Kafle, Seong H Kim, Tobias I Baskin and Samuel P Hazen
    Citation: BMC Plant Biology 2013 13:131
  33. Ramie fiber extracted from stem bark is one of the most important natural fibers. Drought is a main environment stress which severely inhibits the stem growth of ramie and leads to a decrease of the fiber yiel...

    Authors: Touming Liu, Siyuan Zhu, Qingming Tang, Yongting Yu and Shouwei Tang
    Citation: BMC Plant Biology 2013 13:130
  34. Three gametoclonal plants of Citrus clementina Hort. ex Tan., cv. Nules, designated ESP, FRA, and ITA (derived from three labs in Spain, France, and Italy, respectively), were selected for cytological and molecul...

    Authors: Maria Antonietta Germana, Pablo Aleza, Esther Carrera, Chunxian Chen, Benedetta Chiancone, Gilles Costantino, Dominique Dambier, Xiuxin Deng, Claire T Federici, Yann Froelicher, Wenwu Guo, Victoria Ibáñez, José Juárez, Kevin Kwok, François Luro, Marcos A Machado…
    Citation: BMC Plant Biology 2013 13:129
  35. Molecular markers allow rapid identification of biologically important germplasm/s having desired character. Previously we have reported a genotype specific molecular marker, Balco1128 [GenBank ID EU258678] of Ba...

    Authors: Jayadri Sekhar Ghosh, Shubho Chaudhuri, Nrisingha Dey and Amita Pal
    Citation: BMC Plant Biology 2013 13:128
  36. The endophytic fungus, Neotyphodium coenophialum, can enhance drought tolerance of its host grass, tall fescue. To investigate endophyte effects on plant responses to acute water deficit stress, we did comprehens...

    Authors: Padmaja Nagabhyru, Randy D Dinkins, Constance L Wood, Charles W Bacon and Christopher L Schardl
    Citation: BMC Plant Biology 2013 13:127
  37. AGO (Argonaute) protein participates in plant developmental processes and virus defense as a core element of transcriptional regulator or/and post-transcriptional regulator in RNA induced silencing complex (RI...

    Authors: Zhiqiang Xian, Yingwu Yang, Wei Huang, Ning Tang, Xinyu Wang and Zhengguo Li
    Citation: BMC Plant Biology 2013 13:126
  38. Grain texture is one of the most important characteristics in bread wheat (Triticum aestivum L.). Puroindoline-D1 genes play the main role in controlling grain texture and are intimately associated with the milli...

    Authors: Feng Chen, Huanhuan Li and Dangqun Cui
    Citation: BMC Plant Biology 2013 13:125
  39. Cell growth and cell proliferation are intimately linked in the presence of Earth’s gravity, but are decoupled under the microgravity conditions present in orbiting spacecraft. New technologies to simulate mic...

    Authors: Ana Isabel Manzano, Oliver J Larkin, Camelia E Dijkstra, Paul Anthony, Michael R Davey, Laurence Eaves, Richard JA Hill, Raul Herranz and F Javier Medina
    Citation: BMC Plant Biology 2013 13:124
  40. It is during embryogenesis that the plant body plan is established and the meristems responsible for all post-embryonic growth are specified. The molecular mechanisms governing conifer embryogenesis are still ...

    Authors: José J de Vega-Bartol, Marta Simões, W Walter Lorenz, Andreia S Rodrigues, Rob Alba, Jeffrey F D Dean and Célia M Miguel
    Citation: BMC Plant Biology 2013 13:123
  41. In crops, inflorescence complexity and the shape and size of the seed are among the most important characters that influence yield. For example, rice panicles vary considerably in the number and order of branc...

    Authors: Faroq AL-Tam, Helene Adam, António dos Anjos, Mathias Lorieux, Pierre Larmande, Alain Ghesquière, Stefan Jouannic and Hamid Reza Shahbazkia
    Citation: BMC Plant Biology 2013 13:122
  42. The canonical mitogen activated protein kinase (MAPK) signaling pathway plays a vital role in carrying out the normal growth and development of the plant. The pathway, connecting the upstreams signal with the ...

    Authors: Arsheed H Sheikh, Badmi Raghuram, Siddhi K Jalmi, Dhammaprakash P Wankhede, Pallavi Singh and Alok K Sinha
    Citation: BMC Plant Biology 2013 13:121
  43. The genetic basis of growth traits has been widely studied in forest trees. Quantitative trait locus (QTL) studies have highlighted the presence of both stable and unstable genomic regions accounting for bioma...

    Authors: Jérôme Bartholomé, Frédéric Salmon, Philippe Vigneron, Jean-Marc Bouvet, Christophe Plomion and Jean-Marc Gion
    Citation: BMC Plant Biology 2013 13:120
  44. As one of the fastest-growing lignocellulose-abundant plants on Earth, bamboos can reach their final height quickly due to the expansion of individual internodes already present in the buds; however, the molec...

    Authors: Cai-yun He, Kai Cui, Jian-guo Zhang, Ai-guo Duan and Yan-fei Zeng
    Citation: BMC Plant Biology 2013 13:119
  45. Nucleoside phosphorylases (NPs) have been extensively investigated in human and bacterial systems for their role in metabolic nucleotide salvaging and links to oncogenesis. In plants, NP-like proteins have not...

    Authors: Emily A Pettengill, James B Pettengill and Gary D Coleman
    Citation: BMC Plant Biology 2013 13:118
  46. The establishment of sister chromatid cohesion followed by its controlled release at the metaphase to anaphase transition is necessary for faithful segregation of chromosomes in mitosis and meiosis. Cohesion i...

    Authors: Dipesh K Singh, Sebastien Andreuzza, Aneesh P Panoli and Imran Siddiqi
    Citation: BMC Plant Biology 2013 13:117
  47. Among the many commercial opportunities afforded by somatic embryogenesis (SE), it is the ability to clonally propagate individual plants with rare or elite traits that has some of the most significant implica...

    Authors: Robert G Rutledge, Don Stewart, Sébastien Caron, Cathy Overton, Bryan Boyle, John MacKay and Krystyna Klimaszewska
    Citation: BMC Plant Biology 2013 13:116
  48. Lepidium campestre is an undomesticated oilseed species with a great potential to become a new crop for both food and industrial feedstocks production. Genetic modification is needed for further improving the oil...

    Authors: Emelie Ivarson, Annelie Ahlman, Xueyuan Li and Li-Hua Zhu
    Citation: BMC Plant Biology 2013 13:115
  49. Zinc (Zn) and iron (Fe) are essential micronutrients for plant growth and development, their deficiency or excess severely impaired physiological and biochemical reactions of plants. Therefore, a tightly contr...

    Authors: Suzhen Li, Xiaojin Zhou, Yaqun Huang, Liying Zhu, Shaojun Zhang, Yongfeng Zhao, Jinjie Guo, Jingtang Chen and Rumei Chen
    Citation: BMC Plant Biology 2013 13:114

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