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  1. Benzylisoquinoline alkaloids (BIAs) represent a diverse class of plant specialized metabolites sharing a common biosynthetic origin beginning with tyrosine. Many BIAs have potent pharmacological activities, an...

    Authors: Jillian M. Hagel, Jeremy S. Morris, Eun-Jeong Lee, Isabel Desgagné-Penix, Crystal D. Bross, Limei Chang, Xue Chen, Scott C. Farrow, Ye Zhang, Jung Soh, Christoph W. Sensen and Peter J. Facchini
    Citation: BMC Plant Biology 2015 15:227
  2. Perenniality is best understood in quantitative terms, involving the relationship between production vs. turnover of meristems, biomass, or energy reserves. Previous quantitative trait locus (QTL) studies usin...

    Authors: David L. Remington, Jennifer Figueroa and Mitali Rane
    Citation: BMC Plant Biology 2015 15:226
  3. SUMOylation is an important post-translational modification of eukaryotic proteins that involves the reversible conjugation of a small ubiquitin-related modifier (SUMO) polypeptide to its specific protein subs...

    Authors: Feng Liu, Xiao Wang, Mengying Su, Mengyuan Yu, Shengchun Zhang, Jianbin Lai, Chengwei Yang and Yaqin Wang
    Citation: BMC Plant Biology 2015 15:225
  4. Peroxisomes house critical metabolic reactions. For example, fatty acid β-oxidation enzymes, which are essential during early seedling development, are peroxisomal. Peroxins (PEX proteins) are needed to bring ...

    Authors: Yun-Ting Kao and Bonnie Bartel
    Citation: BMC Plant Biology 2015 15:224
  5. Cytokinins are known to play an important role in fruit set and early fruit growth, but their involvement in later stages of fruit development is less well understood. Recent reports of greatly increased cytok...

    Authors: Christine Böttcher, Crista A. Burbidge, Paul K. Boss and Christopher Davies
    Citation: BMC Plant Biology 2015 15:223
  6. Fragmentation of habitats by roads, railroads, fields, buildings and other human activities can affect population size, pollination success, sexual and asexual reproduction specially in plants showing pollinat...

    Authors: Giuseppe Pellegrino, Francesca Bellusci and Anna Maria Palermo
    Citation: BMC Plant Biology 2015 15:222
  7. Currently, Tectona grandis is one of the most valuable trees in the world and no transcript dataset related to secondary xylem is available. Considering how important the secondary xylem and sapwood transition fr...

    Authors: Esteban Galeano, Tarcísio Sales Vasconcelos, Mabel Vidal, Maria Katherine Mejia-Guerra and Helaine Carrer
    Citation: BMC Plant Biology 2015 15:221
  8. Recent progress toward the elucidation of benzylisoquinoline alkaloid (BIA) metabolism has focused on a small number of model plant species. Current understanding of BIA metabolism in plants such as opium popp...

    Authors: Jillian M. Hagel, Rupasri Mandal, Beomsoo Han, Jun Han, Donald R. Dinsmore, Christoph H. Borchers, David S. Wishart and Peter J. Facchini
    Citation: BMC Plant Biology 2015 15:220
  9. Mechanical wounding can cause morphological and developmental changes in plants, which may affect the responses to abiotic stresses. However, the mechano-stimulation triggered regulation network remains elusiv...

    Authors: Xiangnan Li, Chenglong Hao, Jianwen Zhong, Fulai Liu, Jian Cai, Xiao Wang, Qin Zhou, Tingbo Dai, Weixing Cao and Dong Jiang
    Citation: BMC Plant Biology 2015 15:219
  10. Mechanized dry seeded rice can save both labour and water resources. Rice seedling establishment is sensitive to sowing depth while mesocotyl elongation facilitates the emergence of deeply sown seeds.

    Authors: Jinhong Wu, Fangjun Feng, Xingming Lian, Xiaoying Teng, Haibin Wei, Huihui Yu, Weibo Xie, Min Yan, Peiqing Fan, Yang Li, Xiaosong Ma, Hongyan Liu, Sibin Yu, Gongwei Wang, Fasong Zhou, Lijun Luo…
    Citation: BMC Plant Biology 2015 15:218
  11. Long non-coding RNAs (LncRNAs) have been identified as gene regulatory elements that influence the transcription of their neighbouring protein-coding genes. The discovery of LncRNAs in animals has stimulated g...

    Authors: Setareh Mohammadin, Patrick P. Edger, J. Chris Pires and Michael Eric Schranz
    Citation: BMC Plant Biology 2015 15:217
  12. Cold stress is regarded as a key factor limiting widespread use for bermudagrass (Cynodon dactylon). Therefore, to improve cold tolerance for bermudagrass, it is urgent to understand molecular mechanisms of bermu...

    Authors: Liang Chen, Jibiao Fan, Longxing Hu, Zhengrong Hu, Yan Xie, Yingzi Zhang, Yanhong Lou, Eviatar Nevo and Jinmin Fu
    Citation: BMC Plant Biology 2015 15:216
  13. Plant cell walls are dynamic structures involved in all aspects of plant growth, environmental interactions and defense responses, and are the most abundant renewable source of carbon-containing polymers on th...

    Authors: Mathilde Seguela-Arnaud, Caroline Smith, Marcos Castellanos Uribe, Sean May, Harry Fischl, Neil McKenzie and Michael W. Bevan
    Citation: BMC Plant Biology 2015 15:215
  14. Neem tree (Azadirachta indica) is one of the richest sources of skeletally diverse triterpenoids and they are well-known for their broad-spectrum pharmacological and insecticidal properties. However, the abundanc...

    Authors: Avinash Pandreka, Devdutta S. Dandekar, Saikat Haldar, Vairagkar Uttara, Shinde G. Vijayshree, Fayaj A. Mulani, Thiagarayaselvam Aarthy and Hirekodathakallu V. Thulasiram
    Citation: BMC Plant Biology 2015 15:214
  15. Ethylene is a phytohormone known for inducing a triple response in seedlings, leaf abscission and other responses to various stresses. Several studies in model plants have evaluated the importance of this horm...

    Authors: Fabricio Barbosa Monteiro Arraes, Magda Aparecida Beneventi, Maria Eugenia Lisei de Sa, Joaquin Felipe Roca Paixao, Erika Valeria Saliba Albuquerque, Silvana Regina Rockenbach Marin, Eduardo Purgatto, Alexandre Lima Nepomuceno and Maria Fatima Grossi-de-Sa
    Citation: BMC Plant Biology 2015 15:213
  16. Krishna Tulsi, a member of Lamiaceae family, is a herb well known for its spiritual, religious and medicinal importance in India. The common name of this plant is ‘Tulsi’ (or ‘Tulasi’ or ‘Thulasi’) and is cons...

    Authors: Atul K. Upadhyay, Anita R. Chacko, A. Gandhimathi, Pritha Ghosh, K. Harini, Agnel P. Joseph, Adwait G. Joshi, Snehal D. Karpe, Swati Kaushik, Nagesh Kuravadi, Chandana S Lingu, J. Mahita, Ramya Malarini, Sony Malhotra, Manoharan Malini, Oommen K. Mathew…
    Citation: BMC Plant Biology 2015 15:212
  17. Cell culture methods allow the detailed observations of individual plant cells and their internal processes. Whereas cultured cells are more amenable to microscopy, they have had limited use when studying the ...

    Authors: CJ Luo, Raymond Wightman, Elliot Meyerowitz and Stoyan K. Smoukov
    Citation: BMC Plant Biology 2015 15:211
  18. Agrobacterium infection, which is widely used to generate transgenic plants, is often accompanied by T-DNA-linked mutations and transpositions in flowering plants. It is not known if A...

    Authors: Jasmine M. Shah, Anantha Maharasi Ramakrishnan, Amit Kumar Singh, Subalakshmi Ramachandran, Unnikrishnan Unniyampurath, Ajitha Jayshankar, Nithya Balasundaram, Shanmuhapreya Dhanapal, Geoff Hyde and Ramamurthy Baskar
    Citation: BMC Plant Biology 2015 15:210
  19. GRAS transcription factors usually act as integrators of multiple growth regulatory and environmental signals, including axillary shoot meristem formation, root radial pattering, phytohormones, light signaling...

    Authors: Wei Huang, Zhiqiang Xian, Xia Kang, Ning Tang and Zhengguo Li
    Citation: BMC Plant Biology 2015 15:209
  20. Plants are continuously challenged by different environment stresses, and they vary widely in their adjustability. NAC (NAM, ATAF and CUC) transcription factors are known to be crucial in plants tolerance resp...

    Authors: Xiaomin Han, Zongqi Feng, Dandan Xing, Qi Yang, Ruigang Wang, Liwang Qi and Guojing Li
    Citation: BMC Plant Biology 2015 15:208
  21. Basmati rice, originated in the foothills of Himalayas, commands a premium price in the domestic and international markets on account of its unique quality traits. The complex genetic nature of unique traits o...

    Authors: Lakshminarayana R Vemireddy, Sabahat Noor, VV Satyavathi, A Srividhya, A Kaliappan, SRN Parimala, Prathibha M Bharathi, Dondapati A Deborah, KV Sudhakar Rao, N Shobharani, EA Siddiq and Javaregowda Nagaraju
    Citation: BMC Plant Biology 2015 15:207
  22. Northern corn leaf blight (NCLB) caused by Exserohilum turcicum is a destructive disease in maize. Using host resistance to minimize the detrimental effects of NCLB on maize productivity is the most cost-effectiv...

    Authors: Junqiang Ding, Farhan Ali, Gengshen Chen, Huihui Li, George Mahuku, Ning Yang, Luis Narro, Cosmos Magorokosho, Dan Makumbi and Jianbing Yan
    Citation: BMC Plant Biology 2015 15:206
  23. The increasing temperature associated with climate change impacts grapevine phenology and development with critical effects on grape yield and composition. Plant breeding has the potential to deliver new culti...

    Authors: Cléa Houel, Ratthaphon Chatbanyong, Agnès Doligez, Markus Rienth, Serena Foria, Nathalie Luchaire, Catherine Roux, Angélique Adivèze, Gilbert Lopez, Marc Farnos, Anne Pellegrino, Patrice This, Charles Romieu and Laurent Torregrosa
    Citation: BMC Plant Biology 2015 15:205
  24. Maize is a major staple food crop globally and contains various concentrations of vitamins. Folates are essential water-soluble B-vitamins that play an important role as one-carbon (C1) donors and acceptors in...

    Authors: Tong Lian, Wenzhu Guo, Maoran Chen, Jinglai Li, Qiuju Liang, Fang Liu, Hongyan Meng, Bosi Xu, Jinfeng Chen, Chunyi Zhang and Ling Jiang
    Citation: BMC Plant Biology 2015 15:204
  25. The mechanism by which plants synthesize and store high amounts of triacylglycerols (TAG) in tissues other than seeds is not well understood. The comprehension of controls for carbon partitioning and oil accum...

    Authors: Aruna Kilaru, Xia Cao, Parker B. Dabbs, Ha-Jung Sung, Md. Mahbubur Rahman, Nicholas Thrower, Greg Zynda, Ram Podicheti, Enrique Ibarra-Laclette, Luis Herrera-Estrella, Keithanne Mockaitis and John B. Ohlrogge
    Citation: BMC Plant Biology 2015 15:203
  26. Phalaenopsis is one of the important commercial orchids in the world. Members of the P. amabilis species complex represent invaluable germplasm for the breeding program. However, the p...

    Authors: Chi-Chu Tsai, Chang-Hung Chou, Hao-Ven Wang, Ya-Zhu Ko, Tzen-Yuh Chiang and Yu-Chung Chiang
    Citation: BMC Plant Biology 2015 15:202
  27. Retention of sister centromere cohesion during meiosis I and its dissolution at meiosis II is necessary for balanced chromosome segregation and reduction of chromosome number. PATRONUS1 (PANS1) has recently been ...

    Authors: Dipesh Kumar Singh, Charles Spillane and Imran Siddiqi
    Citation: BMC Plant Biology 2015 15:201
  28. The genetic structure and differentiation of wild emmer wheat suggests that genetic diversity is eco-geographically structured. However, very little is known about the structure and extent of the heritable epi...

    Authors: Anna Venetsky, Adva Levy-Zamir, Vadim Khasdan, Katherine Domb and Khalil Kashkush
    Citation: BMC Plant Biology 2015 15:200
  29. Post-transcriptional methylation of RNA cytosine residues to 5-methylcytosine (m5C) is an important modification that regulates RNA metabolism and occurs in both eukaryotes and prokaryotes. Yet, to date, no trans...

    Authors: Alice Louise Burgess, Rakesh David and Iain Robert Searle
    Citation: BMC Plant Biology 2015 15:199
  30. In Eucalyptus genus, studies on genome composition and transposable elements (TEs) are particularly scarce. Nearly half of the recently released Eucalyptus grandis genome is composed by retrotransposons and this ...

    Authors: Helena Sanches Marcon, Douglas Silva Domingues, Juliana Costa Silva, Rafael Junqueira Borges, Fábio Filippi Matioli, Marcos Roberto de Mattos Fontes and Celso Luis Marino
    Citation: BMC Plant Biology 2015 15:198
  31. Perception and transduction of temperature changes result in altered growth enabling plants to adapt to increased ambient temperature. While PHYTOCHROME-INTERACTING FACTOR4 (PIF4) has been identified as a majo...

    Authors: Anja Raschke, Carla Ibañez, Kristian Karsten Ullrich, Muhammad Usman Anwer, Sebastian Becker, Annemarie Glöckner, Jana Trenner, Kathrin Denk, Bernhard Saal, Xiaodong Sun, Min Ni, Seth Jon Davis, Carolin Delker and Marcel Quint
    Citation: BMC Plant Biology 2015 15:197
  32. Pineapple (Ananas comosus var. comosus) is known as the king of fruits for its crown and is the third most important tropical fruit after banana and citrus. The plant, which is indigenous to South America, is the...

    Authors: R. M. Redwan, A. Saidin and S. V. Kumar
    Citation: BMC Plant Biology 2015 15:196

    The Erratum to this article has been published in BMC Plant Biology 2015 15:294

  33. Plant growth-promoting rhizobacteria are increasingly being seen as a way of complementing conventional inputs in agricultural systems. The effects on their host plants are diverse and include volatile-mediate...

    Authors: Pierre Delaplace, Benjamin M. Delory, Caroline Baudson, Magdalena Mendaluk-Saunier de Cazenave, Stijn Spaepen, Sébastien Varin, Yves Brostaux and Patrick du Jardin
    Citation: BMC Plant Biology 2015 15:195
  34. The R2R3-MYB genes regulate pigmentation and morphogenesis of flowers, including flower and cell shape, and therefore have importance in the development of new varieties of orchids. However, new variety developme...

    Authors: Su-Ee Lau, Trude Schwarzacher, Rofina Yasmin Othman and Jennifer Ann Harikrishna
    Citation: BMC Plant Biology 2015 15:194
  35. Dioxins are one of the most toxic groups of persistent organic pollutants. Their biotransmission through the food chain constitutes a potential risk for human health. Plants as principal actors in the food cha...

    Authors: Abdulsamie Hanano, Ibrahem Almousally, Mouhnad Shaban, Nour Moursel, AbdAlbaset Shahadeh and Eskander Alhajji
    Citation: BMC Plant Biology 2015 15:193
  36. Carbon accumulation and remobilization are essential mechanisms in plants to ensure energy transfer between plant tissues with different functions or metabolic needs and to support new generations. Knowledge a...

    Authors: Ã…sa Grimberg, Anders S. Carlsson, Salla Marttila, Rishikesh Bhalerao and Per Hofvander
    Citation: BMC Plant Biology 2015 15:192
  37. The definition of the terroir concept is one of the most debated issues in oenology and viticulture. The dynamic interaction among diverse factors including the environment, the grapevine plant and the imposed vi...

    Authors: Andrea Anesi, Matteo Stocchero, Silvia Dal Santo, Mauro Commisso, Sara Zenoni, Stefania Ceoldo, Giovanni Battista Tornielli, Tracey E. Siebert, Markus Herderich, Mario Pezzotti and Flavia Guzzo
    Citation: BMC Plant Biology 2015 15:191
  38. Tea plants (Camellia sinensis) are used to produce one of the most important beverages worldwide. The nutritional value and healthful properties of tea are closely related to the large amounts of three major char...

    Authors: Yuling Tai, Chaoling Wei, Hua Yang, Liang Zhang, Qi Chen, Weiwei Deng, Shu Wei, Jing Zhang, Congbing Fang, Chitang Ho and Xiaochun Wan
    Citation: BMC Plant Biology 2015 15:190
  39. Calcium ions, the most versatile secondary messenger found in plants, are involved in the regulation of diverse arrays of plant growth and development, as well as biotic and abiotic stress responses. The calci...

    Authors: Tapan Kumar Mohanta, Nibedita Mohanta, Yugal Kishore Mohanta, Pratap Parida and Hanhong Bae
    Citation: BMC Plant Biology 2015 15:189
  40. Cultivated peanut (Arachis hypogaea. L) is one of the most important oil crops in the world. After flowering, the peanut plant forms aboveground pegs (gynophores) that penetrate the soil, giving rise to undergrou...

    Authors: Chuanzhi Zhao, Shuzhen Zhao, Lei Hou, Han Xia, Jiangshan Wang, Changsheng Li, Aiqin Li, Tingting Li, Xinyou Zhang and Xingjun Wang
    Citation: BMC Plant Biology 2015 15:188
  41. The plant cell wall serves as a primary barrier against pathogen invasion. The success of a plant pathogen largely depends on its ability to overcome this barrier. During the infection process, plant parasitic...

    Authors: Krishan Mohan Rai, Vimal Kumar Balasubramanian, Cassie Marie Welker, Mingxiong Pang, Mei Mei Hii and Venugopal Mendu
    Citation: BMC Plant Biology 2015 15:187
  42. Sorghum (Sorghum bicolor L. Moench) cultivars store non-structural carbohydrates predominantly as either starch in seeds (grain sorghums) or sugars in stems (sweet sorghums). Previous research determined that suc...

    Authors: Saadia Bihmidine, R. Frank Baker, Cassandra Hoffner and David M. Braun
    Citation: BMC Plant Biology 2015 15:186
  43. Carotenoid compounds play essential roles in plants such as protecting the photosynthetic apparatus and in hormone signalling. Coloured carotenoids provide yellow, orange and red colour to plant tissues, as we...

    Authors: Charles Ampomah-Dwamena, Nicky Driedonks, David Lewis, Maria Shumskaya, Xiuyin Chen, Eleanore T. Wurtzel, Richard V. Espley and Andrew C. Allan
    Citation: BMC Plant Biology 2015 15:185
  44. Huanglongbing (HLB), the most devastating disease of citrus, is associated with infection by Candidatus Liberibacter asiaticus (CaLas) and is vectored by the Asian citrus psyllid (ACP). Recently, the molecular ba...

    Authors: Nidhi Rawat, Sandhya P. Kiran, Dongliang Du, Fred G. Gmitter Jr and Zhanao Deng
    Citation: BMC Plant Biology 2015 15:184
  45. Wheat is considered the most important cereal crop all over the world. The wheat weevil Sitophilus granarius is a serious insect pests in much of the wheat growing area worldwide and is responsible for significan...

    Authors: Heba H Abouseadaa, Gamal H Osman, Ahmed M Ramadan, Sameh E Hassanein, Mohamed T Abdelsattar, Yasser B Morsy, Hussien F Alameldin, Doaa K El-Ghareeb, Hanan A Nour-Eldin, Reda Salem, Adel A Gad, Soheir E Elkhodary, Maher M Shehata, Hala M Mahfouz, Hala F Eissa and Ahmed Bahieldin
    Citation: BMC Plant Biology 2015 15:183
  46. Generally, double-flowered varieties are more attractive than single-flowered varieties in ornamental plants. Japanese gentian is one of the most popular floricultural plants in Japan, and it is desirable to b...

    Authors: Takashi Nakatsuka, Misa Saito, Eri Yamada, Kohei Fujita, Noriko Yamagishi, Nobuyuki Yoshikawa and Masahiro Nishihara
    Citation: BMC Plant Biology 2015 15:182
  47. Litchi has a high commercial value due to its bright color and rich nutrients. However, it deteriorates with the pericarp turning brown within 1–2 days after harvest. The factors that mediate litchi fruit sene...

    Authors: Furong Yao, Hong Zhu, Chun Yi, Hongxia Qu and Yueming Jiang
    Citation: BMC Plant Biology 2015 15:181
  48. The tuberous root of sweetpotato is undisputedly an important organ from agronomic and biological perspectives. Little is known regarding the regulatory networks programming tuberous root formation and develop...

    Authors: Zhangying Wang, Boping Fang, Xinliang Chen, Minghuan Liao, Jingyi Chen, Xiongjian Zhang, Lifei Huang, Zhongxia Luo, Zhufang Yao and Yujun Li
    Citation: BMC Plant Biology 2015 15:180
  49. Hybridization and polyploidization can be major mechanisms for plant evolution and speciation. Thus, the process of polyploidization and evolutionary history of polyploids is of widespread interest. The specie...

    Authors: Zhen-Zhen Dong, Xing Fan, Li-Na Sha, Yi Wang, Jian Zeng, Hou-Yang Kang, Hai-Qin Zhang, Xiao-Li Wang, Li Zhang, Chun-Bang Ding, Rui-Wu Yang and Yong-Hong Zhou
    Citation: BMC Plant Biology 2015 15:179
  50. The actin cytoskeleton is involved in an array of integral structural and developmental processes throughout the cell. One of actin’s best-studied binding partners is the small ubiquitously expressed protein, ...

    Authors: Kristofer J. Müssar, Muthugapatti K. Kandasamy, Elizabeth C. McKinney and Richard B. Meagher
    Citation: BMC Plant Biology 2015 15:177

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